Protein Family : jmjC domain containing protein, expressed 123425923

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  448

448 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29842.t000041 (1 of 2) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE R. communis v0.1 5327   29842: 218930-224256
29933.t000064 (1 of 1) PTHR12549//PTHR12549:SF13 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN R. communis v0.1 5866   29933: 351537-357402
30024.t000022 (1 of 1) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 9911   30024: 469327-479237
30110.t000001 (1 of 2) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE R. communis v0.1 11159   30110: 111951-123109
30128.t000268 (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN R. communis v0.1 5466   30128: 1129653-1135118
Cucsa.045770 (1 of 1) PTHR12549:SF13 - PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN C. sativus v1.0 5469   scaffold00542: 1491201-1496669
Cucsa.091190 (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN C. sativus v1.0 6294   scaffold00894: 2220092-2226385
Cucsa.067550 (1 of 1) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE C. sativus v1.0 10893   scaffold00699: 36661-47553
Cucsa.259270 (1 of 1) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN C. sativus v1.0 7992   scaffold02229: 5835373-5843364
orange1.1g002333m.g (1 of 4) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE C. sinensis v1.1 6446   scaffold00007: 2003470-2009915
orange1.1g038377m.g (1 of 1) PTHR12549:SF13 - PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN C. sinensis v1.1 5897   scaffold00010: 1491976-1497872
orange1.1g006745m.g (1 of 4) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE C. sinensis v1.1 6069   scaffold00157: 72564-78632
orange1.1g002177m.g (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN C. sinensis v1.1 6675   scaffold00103: 183493-190167
orange1.1g039227m.g (1 of 4) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE C. sinensis v1.1 4502   scaffold00554: 14193-18694
orange1.1g001517m.g (1 of 1) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN C. sinensis v1.1 8053   scaffold00127: 274094-282146
AT4G00990 (1 of 2) KOG1356 - Putative transcription factor 5qNCA, contains JmjC domain A. thaliana TAIR10 4878   Chr4: 426944-431821
AT4G21430 (1 of 1) PTHR12549//PTHR12549:SF13 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN A. thaliana TAIR10 B160 4356   Chr4: 11407804-11412159
AT3G07610 (1 of 6) K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3) A. thaliana TAIR10 IBM1 6845   Chr3: 2426069-2432913
AT1G11950 (1 of 6) K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3) A. thaliana TAIR10 4172   Chr1: 4034587-4038758
AT1G09060 (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN A. thaliana TAIR10 4699   Chr1: 2921064-2925762
AT1G62310 (1 of 1) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) A. thaliana TAIR10 3571   Chr1: 23036039-23039609
Thhalv10024332m.g (1 of 1) PTHR12549:SF13 - PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN E. salsugineum v1.0 4426   scaffold_1: 8062633-8067058
Thhalv10020080m.g (1 of 3) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE E. salsugineum v1.0 4643   scaffold_13: 6965377-6970019
Thhalv10028389m.g (1 of 2) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN E. salsugineum v1.0 5971   scaffold_3: 486567-492537
Thhalv10029199m.g (1 of 2) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN E. salsugineum v1.0 4666   scaffold_3: 493736-498401
Thhalv10006723m.g (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN E. salsugineum v1.0 4844   scaffold_5: 12656681-12661524
Thhalv10006772m.g (1 of 3) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE E. salsugineum v1.0 4625   scaffold_5: 11509518-11514142
Thhalv10023846m.g (1 of 3) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE E. salsugineum v1.0 3583   scaffold_8: 2097627-2101209
Ciclev10000178m.g (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN C. clementina v1.0 6494   scaffold_5: 33225958-33232451
Ciclev10030129m.g (1 of 3) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE C. clementina v1.0 6776   scaffold_8: 16388974-16395749

448 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30128.m008807 R. communis v0.1 123425923 jmjC domain containing protein, expressed 5 5275 Viridiplantae
29842.m003544 R. communis v0.1 123425923 jmjC domain containing protein, expressed 5 5275 Viridiplantae
29933.m001442 R. communis v0.1 123425923 jmjC domain containing protein, expressed 5 5275 Viridiplantae
30024.m001705 R. communis v0.1 123425923 jmjC domain containing protein, expressed 5 5275 Viridiplantae
30110.m000711 R. communis v0.1 123425923 jmjC domain containing protein, expressed 5 5275 Viridiplantae
Cucsa.067550.1 C. sativus v1.0 123425923 jmjC domain containing protein, expressed 4 5275 Viridiplantae
Cucsa.045770.1 C. sativus v1.0 123425923 jmjC domain containing protein, expressed 4 5275 Viridiplantae
Cucsa.091190.1 C. sativus v1.0 123425923 jmjC domain containing protein, expressed 4 5275 Viridiplantae
Cucsa.259270.1 C. sativus v1.0 123425923 jmjC domain containing protein, expressed 4 5275 Viridiplantae
orange1.1g039227m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
orange1.1g002333m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
orange1.1g038377m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
orange1.1g006745m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
orange1.1g002177m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
orange1.1g001517m C. sinensis v1.1 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT1G09060.3 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT4G00990.1 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT4G21430.1 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT3G07610.3 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT1G11950.1 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
AT1G62310.1 A. thaliana TAIR10 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
Thhalv10006772m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10024332m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10020080m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10028389m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10029199m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10006723m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Thhalv10023846m E. salsugineum v1.0 123425923 jmjC domain containing protein, expressed 7 5275 Viridiplantae
Ciclev10018309m C. clementina v1.0 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae
Ciclev10000178m C. clementina v1.0 123425923 jmjC domain containing protein, expressed 6 5275 Viridiplantae