Gene : B160 A. thaliana TAIR10
Primary Identifier:  ? AT4G21430 Defline:  (1 of 1) PTHR12549//PTHR12549:SF13 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN
Genomic Order:  2096 Name:  ? AT4G21430
Secondary Identifier:  ? PAC:19644209
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21430 0.5kb upstream 0.5kb upstream 4856 true Chr4: 11407804-11412659 Arabidopsis thaliana
AT4G21430 0.5kb upstream 0.5kb upstream 500 false Chr4: 11412160-11412659 Arabidopsis thaliana
AT4G21430 0.5kb downstream 0.5kb downstream 4856 true Chr4: 11407304-11412159 Arabidopsis thaliana
AT4G21430 0.5kb downstream 0.5kb downstream 500 false Chr4: 11407304-11407803 Arabidopsis thaliana
AT4G21430 1.0kb upstream 1.0kb upstream 5356 true Chr4: 11407804-11413159 Arabidopsis thaliana
AT4G21430 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11412160-11413159 Arabidopsis thaliana
AT4G21430 1.0kb downstream 1.0kb downstream 5356 true Chr4: 11406804-11412159 Arabidopsis thaliana
AT4G21430 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11406804-11407803 Arabidopsis thaliana
AT4G21430 2.0kb upstream 2.0kb upstream 6356 true Chr4: 11407804-11414159 Arabidopsis thaliana
AT4G21430 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11412160-11414159 Arabidopsis thaliana
AT4G21430 2.0kb downstream 2.0kb downstream 6356 true Chr4: 11405804-11412159 Arabidopsis thaliana
AT4G21430 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11405804-11407803 Arabidopsis thaliana
AT4G21430 5.0kb upstream 5.0kb upstream 9356 true Chr4: 11407804-11417159 Arabidopsis thaliana
AT4G21430 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11412160-11417159 Arabidopsis thaliana
AT4G21430 5.0kb downstream 5.0kb downstream 9356 true Chr4: 11402804-11412159 Arabidopsis thaliana
AT4G21430 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11402804-11407803 Arabidopsis thaliana
AT4G21430 10.0kb upstream 10.0kb upstream 14356 true Chr4: 11407804-11422159 Arabidopsis thaliana
AT4G21430 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11412160-11422159 Arabidopsis thaliana
AT4G21430 10.0kb downstream 10.0kb downstream 14356 true Chr4: 11397804-11412159 Arabidopsis thaliana
AT4G21430 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11397804-11407803 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780008 5273 Angiosperm View MSA
122377581 5261 Brassicaceae View MSA
123835191 5264 Brassicales-Malvales View MSA
124340429 5266 SBM View MSA
124243334 5268 Malvidae View MSA
124050384 5270 Rosid View MSA
123744694 5271 Pentapetalae View MSA
122771220 5272 Eudicot View MSA
121051643 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.288        
cufflinks 7.014        
cufflinks 4.314       Low
cufflinks 7.175       High
cufflinks 4.132       Low
cufflinks 6.436        

0 Strain