Gene : Cagra.0133s0112 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31717:SF8 - ZINC FINGER PROTEIN CONSTANS-LIKE 10-RELATED Genomic Order:  112
Name:  ? Cagra.0133s0112 Secondary Identifier:  ? PAC:28899439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0112 0.5kb upstream 0.5kb upstream 3649 true Scaffold133: 411406-415054 Capsella grandiflora
Cagra.0133s0112 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 411406-411905 Capsella grandiflora
Cagra.0133s0112 0.5kb downstream 0.5kb downstream 3649 true Scaffold133: 411906-415554 Capsella grandiflora
Cagra.0133s0112 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 415055-415554 Capsella grandiflora
Cagra.0133s0112 1.0kb upstream 1.0kb upstream 4149 true Scaffold133: 410906-415054 Capsella grandiflora
Cagra.0133s0112 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 410906-411905 Capsella grandiflora
Cagra.0133s0112 1.0kb downstream 1.0kb downstream 4149 true Scaffold133: 411906-416054 Capsella grandiflora
Cagra.0133s0112 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 415055-416054 Capsella grandiflora
Cagra.0133s0112 2.0kb upstream 2.0kb upstream 5149 true Scaffold133: 409906-415054 Capsella grandiflora
Cagra.0133s0112 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 409906-411905 Capsella grandiflora
Cagra.0133s0112 2.0kb downstream 2.0kb downstream 5149 true Scaffold133: 411906-417054 Capsella grandiflora
Cagra.0133s0112 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 415055-417054 Capsella grandiflora
Cagra.0133s0112 5.0kb upstream 5.0kb upstream 8149 true Scaffold133: 406906-415054 Capsella grandiflora
Cagra.0133s0112 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 406906-411905 Capsella grandiflora
Cagra.0133s0112 5.0kb downstream 5.0kb downstream 8149 true Scaffold133: 411906-420054 Capsella grandiflora
Cagra.0133s0112 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 415055-420054 Capsella grandiflora
Cagra.0133s0112 10.0kb upstream 10.0kb upstream 13149 true Scaffold133: 401906-415054 Capsella grandiflora
Cagra.0133s0112 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 401906-411905 Capsella grandiflora
Cagra.0133s0112 10.0kb downstream 10.0kb downstream 13149 true Scaffold133: 411906-425054 Capsella grandiflora
Cagra.0133s0112 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 415055-425054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372759 5261 Brassicaceae View MSA
123839244 5264 Brassicales-Malvales View MSA
124351347 5266 SBM View MSA
124243820 5268 Malvidae View MSA
124060563 5270 Rosid View MSA
123751246 5271 Pentapetalae View MSA
122785793 5272 Eudicot View MSA
122049477 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain