Gene : Cagra.0134s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  9
Name:  ? Cagra.0134s0009 Secondary Identifier:  ? PAC:28915258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0134s0009 0.5kb upstream 0.5kb upstream 3183 true Scaffold134: 31266-34448 Capsella grandiflora
Cagra.0134s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold134: 33949-34448 Capsella grandiflora
Cagra.0134s0009 0.5kb downstream 0.5kb downstream 3183 true Scaffold134: 30766-33948 Capsella grandiflora
Cagra.0134s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold134: 30766-31265 Capsella grandiflora
Cagra.0134s0009 1.0kb upstream 1.0kb upstream 3683 true Scaffold134: 31266-34948 Capsella grandiflora
Cagra.0134s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold134: 33949-34948 Capsella grandiflora
Cagra.0134s0009 1.0kb downstream 1.0kb downstream 3683 true Scaffold134: 30266-33948 Capsella grandiflora
Cagra.0134s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold134: 30266-31265 Capsella grandiflora
Cagra.0134s0009 2.0kb upstream 2.0kb upstream 4683 true Scaffold134: 31266-35948 Capsella grandiflora
Cagra.0134s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold134: 33949-35948 Capsella grandiflora
Cagra.0134s0009 2.0kb downstream 2.0kb downstream 4683 true Scaffold134: 29266-33948 Capsella grandiflora
Cagra.0134s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold134: 29266-31265 Capsella grandiflora
Cagra.0134s0009 5.0kb upstream 5.0kb upstream 7683 true Scaffold134: 31266-38948 Capsella grandiflora
Cagra.0134s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold134: 33949-38948 Capsella grandiflora
Cagra.0134s0009 5.0kb downstream 5.0kb downstream 7683 true Scaffold134: 26266-33948 Capsella grandiflora
Cagra.0134s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold134: 26266-31265 Capsella grandiflora
Cagra.0134s0009 10.0kb upstream 10.0kb upstream 12683 true Scaffold134: 31266-43948 Capsella grandiflora
Cagra.0134s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold134: 33949-43948 Capsella grandiflora
Cagra.0134s0009 10.0kb downstream 10.0kb downstream 12683 true Scaffold134: 21266-33948 Capsella grandiflora
Cagra.0134s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold134: 21266-31265 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375838 5261 Brassicaceae View MSA
123835307 5264 Brassicales-Malvales View MSA
124339608 5266 SBM View MSA
124241926 5268 Malvidae View MSA
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain