Gene : Cagra.0138s0001 C. grandiflora v1.1
Defline:  (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) Genomic Order:  1
Name:  ? Cagra.0138s0001 Secondary Identifier:  ? PAC:28894153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0138s0001 0.5kb upstream 0.5kb upstream 2776 true Scaffold138: 1-2776 Capsella grandiflora
Cagra.0138s0001 0.5kb upstream 0.5kb upstream 16 false Scaffold138: 1-16 Capsella grandiflora
Cagra.0138s0001 0.5kb downstream 0.5kb downstream 3260 true Scaffold138: 17-3276 Capsella grandiflora
Cagra.0138s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold138: 2777-3276 Capsella grandiflora
Cagra.0138s0001 1.0kb upstream 1.0kb upstream 2776 true Scaffold138: 1-2776 Capsella grandiflora
Cagra.0138s0001 1.0kb upstream 1.0kb upstream 16 false Scaffold138: 1-16 Capsella grandiflora
Cagra.0138s0001 1.0kb downstream 1.0kb downstream 3760 true Scaffold138: 17-3776 Capsella grandiflora
Cagra.0138s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold138: 2777-3776 Capsella grandiflora
Cagra.0138s0001 2.0kb upstream 2.0kb upstream 2776 true Scaffold138: 1-2776 Capsella grandiflora
Cagra.0138s0001 2.0kb upstream 2.0kb upstream 16 false Scaffold138: 1-16 Capsella grandiflora
Cagra.0138s0001 2.0kb downstream 2.0kb downstream 4760 true Scaffold138: 17-4776 Capsella grandiflora
Cagra.0138s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold138: 2777-4776 Capsella grandiflora
Cagra.0138s0001 5.0kb upstream 5.0kb upstream 2776 true Scaffold138: 1-2776 Capsella grandiflora
Cagra.0138s0001 5.0kb upstream 5.0kb upstream 16 false Scaffold138: 1-16 Capsella grandiflora
Cagra.0138s0001 5.0kb downstream 5.0kb downstream 7760 true Scaffold138: 17-7776 Capsella grandiflora
Cagra.0138s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold138: 2777-7776 Capsella grandiflora
Cagra.0138s0001 10.0kb upstream 10.0kb upstream 2776 true Scaffold138: 1-2776 Capsella grandiflora
Cagra.0138s0001 10.0kb upstream 10.0kb upstream 16 false Scaffold138: 1-16 Capsella grandiflora
Cagra.0138s0001 10.0kb downstream 10.0kb downstream 7776 true Scaffold138: 17-7792 Capsella grandiflora
Cagra.0138s0001 10.0kb downstream 10.0kb downstream 5016 false Scaffold138: 2777-7792 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365376 5261 Brassicaceae View MSA
123838747 5264 Brassicales-Malvales View MSA
124339106 5266 SBM View MSA
124238465 5268 Malvidae View MSA
124064193 5270 Rosid View MSA
123753168 5271 Pentapetalae View MSA
122797906 5272 Eudicot View MSA
122042227 5273 Angiosperm View MSA
123429152 5275 Viridiplantae View MSA
121348826 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain