Gene : Cagra.0134s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12309 - SEC61 GAMMA SUBUNIT Genomic Order:  6
Name:  ? Cagra.0134s0006 Secondary Identifier:  ? PAC:28915251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0134s0006 0.5kb upstream 0.5kb upstream 1682 true Scaffold134: 24826-26507 Capsella grandiflora
Cagra.0134s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold134: 26008-26507 Capsella grandiflora
Cagra.0134s0006 0.5kb downstream 0.5kb downstream 1682 true Scaffold134: 24326-26007 Capsella grandiflora
Cagra.0134s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold134: 24326-24825 Capsella grandiflora
Cagra.0134s0006 1.0kb upstream 1.0kb upstream 2182 true Scaffold134: 24826-27007 Capsella grandiflora
Cagra.0134s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold134: 26008-27007 Capsella grandiflora
Cagra.0134s0006 1.0kb downstream 1.0kb downstream 2182 true Scaffold134: 23826-26007 Capsella grandiflora
Cagra.0134s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold134: 23826-24825 Capsella grandiflora
Cagra.0134s0006 2.0kb upstream 2.0kb upstream 3182 true Scaffold134: 24826-28007 Capsella grandiflora
Cagra.0134s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold134: 26008-28007 Capsella grandiflora
Cagra.0134s0006 2.0kb downstream 2.0kb downstream 3182 true Scaffold134: 22826-26007 Capsella grandiflora
Cagra.0134s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold134: 22826-24825 Capsella grandiflora
Cagra.0134s0006 5.0kb upstream 5.0kb upstream 6182 true Scaffold134: 24826-31007 Capsella grandiflora
Cagra.0134s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold134: 26008-31007 Capsella grandiflora
Cagra.0134s0006 5.0kb downstream 5.0kb downstream 6182 true Scaffold134: 19826-26007 Capsella grandiflora
Cagra.0134s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold134: 19826-24825 Capsella grandiflora
Cagra.0134s0006 10.0kb upstream 10.0kb upstream 11182 true Scaffold134: 24826-36007 Capsella grandiflora
Cagra.0134s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold134: 26008-36007 Capsella grandiflora
Cagra.0134s0006 10.0kb downstream 10.0kb downstream 11182 true Scaffold134: 14826-26007 Capsella grandiflora
Cagra.0134s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold134: 14826-24825 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510562 5273 Angiosperm View MSA
122365454 5261 Brassicaceae View MSA
123798960 5264 Brassicales-Malvales View MSA
124296532 5266 SBM View MSA
124148656 5268 Malvidae View MSA
123874611 5270 Rosid View MSA
123458558 5271 Pentapetalae View MSA
122493962 5272 Eudicot View MSA
120783655 5274 Embryophyte View MSA
122825639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain