Gene : Cagra.0133s0047 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11926:SF308 - STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2 Genomic Order:  47
Name:  ? Cagra.0133s0047 Secondary Identifier:  ? PAC:28899472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0047 0.5kb upstream 0.5kb upstream 4552 true Scaffold133: 184611-189162 Capsella grandiflora
Cagra.0133s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 188663-189162 Capsella grandiflora
Cagra.0133s0047 0.5kb downstream 0.5kb downstream 4552 true Scaffold133: 184111-188662 Capsella grandiflora
Cagra.0133s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 184111-184610 Capsella grandiflora
Cagra.0133s0047 1.0kb upstream 1.0kb upstream 5052 true Scaffold133: 184611-189662 Capsella grandiflora
Cagra.0133s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 188663-189662 Capsella grandiflora
Cagra.0133s0047 1.0kb downstream 1.0kb downstream 5052 true Scaffold133: 183611-188662 Capsella grandiflora
Cagra.0133s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 183611-184610 Capsella grandiflora
Cagra.0133s0047 2.0kb upstream 2.0kb upstream 6052 true Scaffold133: 184611-190662 Capsella grandiflora
Cagra.0133s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 188663-190662 Capsella grandiflora
Cagra.0133s0047 2.0kb downstream 2.0kb downstream 6052 true Scaffold133: 182611-188662 Capsella grandiflora
Cagra.0133s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 182611-184610 Capsella grandiflora
Cagra.0133s0047 5.0kb upstream 5.0kb upstream 9052 true Scaffold133: 184611-193662 Capsella grandiflora
Cagra.0133s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 188663-193662 Capsella grandiflora
Cagra.0133s0047 5.0kb downstream 5.0kb downstream 9052 true Scaffold133: 179611-188662 Capsella grandiflora
Cagra.0133s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 179611-184610 Capsella grandiflora
Cagra.0133s0047 10.0kb upstream 10.0kb upstream 14052 true Scaffold133: 184611-198662 Capsella grandiflora
Cagra.0133s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 188663-198662 Capsella grandiflora
Cagra.0133s0047 10.0kb downstream 10.0kb downstream 14052 true Scaffold133: 174611-188662 Capsella grandiflora
Cagra.0133s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 174611-184610 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365728 5261 Brassicaceae View MSA
123834919 5264 Brassicales-Malvales View MSA
124350000 5266 SBM View MSA
124251500 5268 Malvidae View MSA
124064362 5270 Rosid View MSA
123751463 5271 Pentapetalae View MSA
122789522 5272 Eudicot View MSA
122051412 5273 Angiosperm View MSA
121349379 5274 Embryophyte View MSA
123425630 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain