Gene : Cagra.0133s0086 C. grandiflora v1.1
Defline:  (1 of 3) PF02325 - YGGT family (YGGT) Genomic Order:  86
Name:  ? Cagra.0133s0086 Secondary Identifier:  ? PAC:28899416
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0086 0.5kb upstream 0.5kb upstream 1744 true Scaffold133: 339679-341422 Capsella grandiflora
Cagra.0133s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 339679-340178 Capsella grandiflora
Cagra.0133s0086 0.5kb downstream 0.5kb downstream 1744 true Scaffold133: 340179-341922 Capsella grandiflora
Cagra.0133s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 341423-341922 Capsella grandiflora
Cagra.0133s0086 1.0kb upstream 1.0kb upstream 2244 true Scaffold133: 339179-341422 Capsella grandiflora
Cagra.0133s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 339179-340178 Capsella grandiflora
Cagra.0133s0086 1.0kb downstream 1.0kb downstream 2244 true Scaffold133: 340179-342422 Capsella grandiflora
Cagra.0133s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 341423-342422 Capsella grandiflora
Cagra.0133s0086 2.0kb upstream 2.0kb upstream 3244 true Scaffold133: 338179-341422 Capsella grandiflora
Cagra.0133s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 338179-340178 Capsella grandiflora
Cagra.0133s0086 2.0kb downstream 2.0kb downstream 3244 true Scaffold133: 340179-343422 Capsella grandiflora
Cagra.0133s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 341423-343422 Capsella grandiflora
Cagra.0133s0086 5.0kb upstream 5.0kb upstream 6244 true Scaffold133: 335179-341422 Capsella grandiflora
Cagra.0133s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 335179-340178 Capsella grandiflora
Cagra.0133s0086 5.0kb downstream 5.0kb downstream 6244 true Scaffold133: 340179-346422 Capsella grandiflora
Cagra.0133s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 341423-346422 Capsella grandiflora
Cagra.0133s0086 10.0kb upstream 10.0kb upstream 11244 true Scaffold133: 330179-341422 Capsella grandiflora
Cagra.0133s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 330179-340178 Capsella grandiflora
Cagra.0133s0086 10.0kb downstream 10.0kb downstream 11244 true Scaffold133: 340179-351422 Capsella grandiflora
Cagra.0133s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 341423-351422 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362307 5261 Brassicaceae View MSA
123837376 5264 Brassicales-Malvales View MSA
124347304 5266 SBM View MSA
124238309 5268 Malvidae View MSA
124073194 5270 Rosid View MSA
123747708 5271 Pentapetalae View MSA
122788477 5272 Eudicot View MSA
122044602 5273 Angiosperm View MSA
121348481 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain