Gene : Cagra.0114s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10513 - DEOXYNUCLEOSIDE KINASE Genomic Order:  39
Name:  ? Cagra.0114s0039 Secondary Identifier:  ? PAC:28915756
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7199 Capsella grandiflora pathologic  
Cgrandiflora PWY-7200 Capsella grandiflora pathologic  
Cgrandiflora PWY-7224 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0039 0.5kb upstream 0.5kb upstream 2814 true Scaffold114: 149536-152349 Capsella grandiflora
Cagra.0114s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 151850-152349 Capsella grandiflora
Cagra.0114s0039 0.5kb downstream 0.5kb downstream 2814 true Scaffold114: 149036-151849 Capsella grandiflora
Cagra.0114s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 149036-149535 Capsella grandiflora
Cagra.0114s0039 1.0kb upstream 1.0kb upstream 3314 true Scaffold114: 149536-152849 Capsella grandiflora
Cagra.0114s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 151850-152849 Capsella grandiflora
Cagra.0114s0039 1.0kb downstream 1.0kb downstream 3314 true Scaffold114: 148536-151849 Capsella grandiflora
Cagra.0114s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 148536-149535 Capsella grandiflora
Cagra.0114s0039 2.0kb upstream 2.0kb upstream 4314 true Scaffold114: 149536-153849 Capsella grandiflora
Cagra.0114s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 151850-153849 Capsella grandiflora
Cagra.0114s0039 2.0kb downstream 2.0kb downstream 4314 true Scaffold114: 147536-151849 Capsella grandiflora
Cagra.0114s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 147536-149535 Capsella grandiflora
Cagra.0114s0039 5.0kb upstream 5.0kb upstream 7314 true Scaffold114: 149536-156849 Capsella grandiflora
Cagra.0114s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 151850-156849 Capsella grandiflora
Cagra.0114s0039 5.0kb downstream 5.0kb downstream 7314 true Scaffold114: 144536-151849 Capsella grandiflora
Cagra.0114s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 144536-149535 Capsella grandiflora
Cagra.0114s0039 10.0kb upstream 10.0kb upstream 12314 true Scaffold114: 149536-161849 Capsella grandiflora
Cagra.0114s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 151850-161849 Capsella grandiflora
Cagra.0114s0039 10.0kb downstream 10.0kb downstream 12314 true Scaffold114: 139536-151849 Capsella grandiflora
Cagra.0114s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 139536-149535 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343847 5261 Brassicaceae View MSA
123837850 5264 Brassicales-Malvales View MSA
124343896 5266 SBM View MSA
124244992 5268 Malvidae View MSA
124064096 5270 Rosid View MSA
123742042 5271 Pentapetalae View MSA
122786834 5272 Eudicot View MSA
122044312 5273 Angiosperm View MSA
121349442 5274 Embryophyte View MSA
123425271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain