Gene : Cagra.0114s0047 C. grandiflora v1.1
Defline:  (1 of 6) PTHR11654:SF94 - PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  47
Name:  ? Cagra.0114s0047 Secondary Identifier:  ? PAC:28915815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0047 0.5kb upstream 0.5kb upstream 2443 true Scaffold114: 184841-187283 Capsella grandiflora
Cagra.0114s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 184841-185340 Capsella grandiflora
Cagra.0114s0047 0.5kb downstream 0.5kb downstream 2443 true Scaffold114: 185341-187783 Capsella grandiflora
Cagra.0114s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 187284-187783 Capsella grandiflora
Cagra.0114s0047 1.0kb upstream 1.0kb upstream 2943 true Scaffold114: 184341-187283 Capsella grandiflora
Cagra.0114s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 184341-185340 Capsella grandiflora
Cagra.0114s0047 1.0kb downstream 1.0kb downstream 2943 true Scaffold114: 185341-188283 Capsella grandiflora
Cagra.0114s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 187284-188283 Capsella grandiflora
Cagra.0114s0047 2.0kb upstream 2.0kb upstream 3943 true Scaffold114: 183341-187283 Capsella grandiflora
Cagra.0114s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 183341-185340 Capsella grandiflora
Cagra.0114s0047 2.0kb downstream 2.0kb downstream 3943 true Scaffold114: 185341-189283 Capsella grandiflora
Cagra.0114s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 187284-189283 Capsella grandiflora
Cagra.0114s0047 5.0kb upstream 5.0kb upstream 6943 true Scaffold114: 180341-187283 Capsella grandiflora
Cagra.0114s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 180341-185340 Capsella grandiflora
Cagra.0114s0047 5.0kb downstream 5.0kb downstream 6943 true Scaffold114: 185341-192283 Capsella grandiflora
Cagra.0114s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 187284-192283 Capsella grandiflora
Cagra.0114s0047 10.0kb upstream 10.0kb upstream 11943 true Scaffold114: 175341-187283 Capsella grandiflora
Cagra.0114s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 175341-185340 Capsella grandiflora
Cagra.0114s0047 10.0kb downstream 10.0kb downstream 11943 true Scaffold114: 185341-197283 Capsella grandiflora
Cagra.0114s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 187284-197283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363031 5261 Brassicaceae View MSA
123798467 5264 Brassicales-Malvales View MSA
124296098 5266 SBM View MSA
124256213 5268 Malvidae View MSA
124074847 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain