Gene : Cagra.0133s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10682:SF20 - POLY(A) POLYMERASE Genomic Order:  4
Name:  ? Cagra.0133s0004 Secondary Identifier:  ? PAC:28899506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0004 0.5kb upstream 0.5kb upstream 3583 true Scaffold133: 16521-20103 Capsella grandiflora
Cagra.0133s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 16521-17020 Capsella grandiflora
Cagra.0133s0004 0.5kb downstream 0.5kb downstream 3583 true Scaffold133: 17021-20603 Capsella grandiflora
Cagra.0133s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 20104-20603 Capsella grandiflora
Cagra.0133s0004 1.0kb upstream 1.0kb upstream 4083 true Scaffold133: 16021-20103 Capsella grandiflora
Cagra.0133s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 16021-17020 Capsella grandiflora
Cagra.0133s0004 1.0kb downstream 1.0kb downstream 4083 true Scaffold133: 17021-21103 Capsella grandiflora
Cagra.0133s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 20104-21103 Capsella grandiflora
Cagra.0133s0004 2.0kb upstream 2.0kb upstream 5083 true Scaffold133: 15021-20103 Capsella grandiflora
Cagra.0133s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 15021-17020 Capsella grandiflora
Cagra.0133s0004 2.0kb downstream 2.0kb downstream 5083 true Scaffold133: 17021-22103 Capsella grandiflora
Cagra.0133s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 20104-22103 Capsella grandiflora
Cagra.0133s0004 5.0kb upstream 5.0kb upstream 8083 true Scaffold133: 12021-20103 Capsella grandiflora
Cagra.0133s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 12021-17020 Capsella grandiflora
Cagra.0133s0004 5.0kb downstream 5.0kb downstream 8083 true Scaffold133: 17021-25103 Capsella grandiflora
Cagra.0133s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 20104-25103 Capsella grandiflora
Cagra.0133s0004 10.0kb upstream 10.0kb upstream 13083 true Scaffold133: 7021-20103 Capsella grandiflora
Cagra.0133s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 7021-17020 Capsella grandiflora
Cagra.0133s0004 10.0kb downstream 10.0kb downstream 13083 true Scaffold133: 17021-30103 Capsella grandiflora
Cagra.0133s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 20104-30103 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027667 5273 Angiosperm View MSA
122362252 5261 Brassicaceae View MSA
123827432 5264 Brassicales-Malvales View MSA
124340543 5266 SBM View MSA
124244645 5268 Malvidae View MSA
124064729 5270 Rosid View MSA
123744398 5271 Pentapetalae View MSA
122789964 5272 Eudicot View MSA
123429108 5275 Viridiplantae View MSA
121351142 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain