Gene : Cagra.0133s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  14
Name:  ? Cagra.0133s0014 Secondary Identifier:  ? PAC:28899425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0014 0.5kb upstream 0.5kb upstream 3004 true Scaffold133: 59526-62529 Capsella grandiflora
Cagra.0133s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 59526-60025 Capsella grandiflora
Cagra.0133s0014 0.5kb downstream 0.5kb downstream 3004 true Scaffold133: 60026-63029 Capsella grandiflora
Cagra.0133s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 62530-63029 Capsella grandiflora
Cagra.0133s0014 1.0kb upstream 1.0kb upstream 3504 true Scaffold133: 59026-62529 Capsella grandiflora
Cagra.0133s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 59026-60025 Capsella grandiflora
Cagra.0133s0014 1.0kb downstream 1.0kb downstream 3504 true Scaffold133: 60026-63529 Capsella grandiflora
Cagra.0133s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 62530-63529 Capsella grandiflora
Cagra.0133s0014 2.0kb upstream 2.0kb upstream 4504 true Scaffold133: 58026-62529 Capsella grandiflora
Cagra.0133s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 58026-60025 Capsella grandiflora
Cagra.0133s0014 2.0kb downstream 2.0kb downstream 4504 true Scaffold133: 60026-64529 Capsella grandiflora
Cagra.0133s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 62530-64529 Capsella grandiflora
Cagra.0133s0014 5.0kb upstream 5.0kb upstream 7504 true Scaffold133: 55026-62529 Capsella grandiflora
Cagra.0133s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 55026-60025 Capsella grandiflora
Cagra.0133s0014 5.0kb downstream 5.0kb downstream 7504 true Scaffold133: 60026-67529 Capsella grandiflora
Cagra.0133s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 62530-67529 Capsella grandiflora
Cagra.0133s0014 10.0kb upstream 10.0kb upstream 12504 true Scaffold133: 50026-62529 Capsella grandiflora
Cagra.0133s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 50026-60025 Capsella grandiflora
Cagra.0133s0014 10.0kb downstream 10.0kb downstream 12504 true Scaffold133: 60026-72529 Capsella grandiflora
Cagra.0133s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 62530-72529 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363799 5261 Brassicaceae View MSA
123841585 5264 Brassicales-Malvales View MSA
124345104 5266 SBM View MSA
124253889 5268 Malvidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain