Gene : Cagra.0104s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19868 - RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 Genomic Order:  5
Name:  ? Cagra.0104s0005 Secondary Identifier:  ? PAC:28906184
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0104s0005 0.5kb upstream 0.5kb upstream 2065 true Scaffold104: 19264-21328 Capsella grandiflora
Cagra.0104s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold104: 20829-21328 Capsella grandiflora
Cagra.0104s0005 0.5kb downstream 0.5kb downstream 2065 true Scaffold104: 18764-20828 Capsella grandiflora
Cagra.0104s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold104: 18764-19263 Capsella grandiflora
Cagra.0104s0005 1.0kb upstream 1.0kb upstream 2565 true Scaffold104: 19264-21828 Capsella grandiflora
Cagra.0104s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold104: 20829-21828 Capsella grandiflora
Cagra.0104s0005 1.0kb downstream 1.0kb downstream 2565 true Scaffold104: 18264-20828 Capsella grandiflora
Cagra.0104s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold104: 18264-19263 Capsella grandiflora
Cagra.0104s0005 2.0kb upstream 2.0kb upstream 3565 true Scaffold104: 19264-22828 Capsella grandiflora
Cagra.0104s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold104: 20829-22828 Capsella grandiflora
Cagra.0104s0005 2.0kb downstream 2.0kb downstream 3565 true Scaffold104: 17264-20828 Capsella grandiflora
Cagra.0104s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold104: 17264-19263 Capsella grandiflora
Cagra.0104s0005 5.0kb upstream 5.0kb upstream 6565 true Scaffold104: 19264-25828 Capsella grandiflora
Cagra.0104s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold104: 20829-25828 Capsella grandiflora
Cagra.0104s0005 5.0kb downstream 5.0kb downstream 6565 true Scaffold104: 14264-20828 Capsella grandiflora
Cagra.0104s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold104: 14264-19263 Capsella grandiflora
Cagra.0104s0005 10.0kb upstream 10.0kb upstream 11565 true Scaffold104: 19264-30828 Capsella grandiflora
Cagra.0104s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold104: 20829-30828 Capsella grandiflora
Cagra.0104s0005 10.0kb downstream 10.0kb downstream 11565 true Scaffold104: 9264-20828 Capsella grandiflora
Cagra.0104s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold104: 9264-19263 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367753 5261 Brassicaceae View MSA
123841140 5264 Brassicales-Malvales View MSA
124340047 5266 SBM View MSA
124242029 5268 Malvidae View MSA
124066721 5270 Rosid View MSA
123750038 5271 Pentapetalae View MSA
122796684 5272 Eudicot View MSA
122048044 5273 Angiosperm View MSA
121346786 5274 Embryophyte View MSA
123424473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain