Gene : Cagra.0110s0015 C. grandiflora v1.1
Defline:  (1 of 21) PTHR22844 - F-BOX AND WD40 DOMAIN PROTEIN Genomic Order:  15
Name:  ? Cagra.0110s0015 Secondary Identifier:  ? PAC:28919161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0110s0015 0.5kb upstream 0.5kb upstream 2978 true Scaffold110: 57191-60168 Capsella grandiflora
Cagra.0110s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold110: 59669-60168 Capsella grandiflora
Cagra.0110s0015 0.5kb downstream 0.5kb downstream 2978 true Scaffold110: 56691-59668 Capsella grandiflora
Cagra.0110s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold110: 56691-57190 Capsella grandiflora
Cagra.0110s0015 1.0kb upstream 1.0kb upstream 3478 true Scaffold110: 57191-60668 Capsella grandiflora
Cagra.0110s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold110: 59669-60668 Capsella grandiflora
Cagra.0110s0015 1.0kb downstream 1.0kb downstream 3478 true Scaffold110: 56191-59668 Capsella grandiflora
Cagra.0110s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold110: 56191-57190 Capsella grandiflora
Cagra.0110s0015 2.0kb upstream 2.0kb upstream 4478 true Scaffold110: 57191-61668 Capsella grandiflora
Cagra.0110s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold110: 59669-61668 Capsella grandiflora
Cagra.0110s0015 2.0kb downstream 2.0kb downstream 4478 true Scaffold110: 55191-59668 Capsella grandiflora
Cagra.0110s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold110: 55191-57190 Capsella grandiflora
Cagra.0110s0015 5.0kb upstream 5.0kb upstream 5073 true Scaffold110: 57191-62263 Capsella grandiflora
Cagra.0110s0015 5.0kb upstream 5.0kb upstream 2595 false Scaffold110: 59669-62263 Capsella grandiflora
Cagra.0110s0015 5.0kb downstream 5.0kb downstream 7478 true Scaffold110: 52191-59668 Capsella grandiflora
Cagra.0110s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold110: 52191-57190 Capsella grandiflora
Cagra.0110s0015 10.0kb upstream 10.0kb upstream 5073 true Scaffold110: 57191-62263 Capsella grandiflora
Cagra.0110s0015 10.0kb upstream 10.0kb upstream 2595 false Scaffold110: 59669-62263 Capsella grandiflora
Cagra.0110s0015 10.0kb downstream 10.0kb downstream 12478 true Scaffold110: 47191-59668 Capsella grandiflora
Cagra.0110s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold110: 47191-57190 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121535462 5273 Angiosperm View MSA
122332318 5261 Brassicaceae Singleton cluster - no MSA
123773398 5264 Brassicales-Malvales Singleton cluster - no MSA
124349662 5266 SBM View MSA
124181025 5268 Malvidae View MSA
123903092 5270 Rosid View MSA
123484746 5271 Pentapetalae View MSA
122519972 5272 Eudicot View MSA
120808224 5274 Embryophyte View MSA
122849777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain