Gene : Cagra.0114s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11709//PTHR11709:SF89 - MULTI-COPPER OXIDASE Genomic Order:  3
Name:  ? Cagra.0114s0003 Secondary Identifier:  ? PAC:28915753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0003 0.5kb upstream 0.5kb upstream 3304 true Scaffold114: 9020-12323 Capsella grandiflora
Cagra.0114s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 11824-12323 Capsella grandiflora
Cagra.0114s0003 0.5kb downstream 0.5kb downstream 3304 true Scaffold114: 8520-11823 Capsella grandiflora
Cagra.0114s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 8520-9019 Capsella grandiflora
Cagra.0114s0003 1.0kb upstream 1.0kb upstream 3804 true Scaffold114: 9020-12823 Capsella grandiflora
Cagra.0114s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 11824-12823 Capsella grandiflora
Cagra.0114s0003 1.0kb downstream 1.0kb downstream 3804 true Scaffold114: 8020-11823 Capsella grandiflora
Cagra.0114s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 8020-9019 Capsella grandiflora
Cagra.0114s0003 2.0kb upstream 2.0kb upstream 4804 true Scaffold114: 9020-13823 Capsella grandiflora
Cagra.0114s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 11824-13823 Capsella grandiflora
Cagra.0114s0003 2.0kb downstream 2.0kb downstream 4804 true Scaffold114: 7020-11823 Capsella grandiflora
Cagra.0114s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 7020-9019 Capsella grandiflora
Cagra.0114s0003 5.0kb upstream 5.0kb upstream 7804 true Scaffold114: 9020-16823 Capsella grandiflora
Cagra.0114s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 11824-16823 Capsella grandiflora
Cagra.0114s0003 5.0kb downstream 5.0kb downstream 7804 true Scaffold114: 4020-11823 Capsella grandiflora
Cagra.0114s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 4020-9019 Capsella grandiflora
Cagra.0114s0003 10.0kb upstream 10.0kb upstream 12804 true Scaffold114: 9020-21823 Capsella grandiflora
Cagra.0114s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 11824-21823 Capsella grandiflora
Cagra.0114s0003 10.0kb downstream 10.0kb downstream 11823 true Scaffold114: 1-11823 Capsella grandiflora
Cagra.0114s0003 10.0kb downstream 10.0kb downstream 9019 false Scaffold114: 1-9019 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362062 5261 Brassicaceae View MSA
123837234 5264 Brassicales-Malvales View MSA
124340020 5266 SBM View MSA
124242667 5268 Malvidae View MSA
124061709 5270 Rosid View MSA
123740196 5271 Pentapetalae View MSA
122792722 5272 Eudicot View MSA
122045679 5273 Angiosperm View MSA
121347815 5274 Embryophyte View MSA
123380640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain