Gene : Cagra.0096s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10992:SF837 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  16
Name:  ? Cagra.0096s0016 Secondary Identifier:  ? PAC:28897002
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0016 0.5kb upstream 0.5kb upstream 2093 true Scaffold96: 71585-73677 Capsella grandiflora
Cagra.0096s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 71585-72084 Capsella grandiflora
Cagra.0096s0016 0.5kb downstream 0.5kb downstream 2093 true Scaffold96: 72085-74177 Capsella grandiflora
Cagra.0096s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 73678-74177 Capsella grandiflora
Cagra.0096s0016 1.0kb upstream 1.0kb upstream 2593 true Scaffold96: 71085-73677 Capsella grandiflora
Cagra.0096s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 71085-72084 Capsella grandiflora
Cagra.0096s0016 1.0kb downstream 1.0kb downstream 2593 true Scaffold96: 72085-74677 Capsella grandiflora
Cagra.0096s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 73678-74677 Capsella grandiflora
Cagra.0096s0016 2.0kb upstream 2.0kb upstream 3593 true Scaffold96: 70085-73677 Capsella grandiflora
Cagra.0096s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 70085-72084 Capsella grandiflora
Cagra.0096s0016 2.0kb downstream 2.0kb downstream 3593 true Scaffold96: 72085-75677 Capsella grandiflora
Cagra.0096s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 73678-75677 Capsella grandiflora
Cagra.0096s0016 5.0kb upstream 5.0kb upstream 6593 true Scaffold96: 67085-73677 Capsella grandiflora
Cagra.0096s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 67085-72084 Capsella grandiflora
Cagra.0096s0016 5.0kb downstream 5.0kb downstream 6593 true Scaffold96: 72085-78677 Capsella grandiflora
Cagra.0096s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 73678-78677 Capsella grandiflora
Cagra.0096s0016 10.0kb upstream 10.0kb upstream 11593 true Scaffold96: 62085-73677 Capsella grandiflora
Cagra.0096s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 62085-72084 Capsella grandiflora
Cagra.0096s0016 10.0kb downstream 10.0kb downstream 11593 true Scaffold96: 72085-83677 Capsella grandiflora
Cagra.0096s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 73678-83677 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376174 5261 Brassicaceae View MSA
123838606 5264 Brassicales-Malvales View MSA
124349215 5266 SBM View MSA
124244358 5268 Malvidae View MSA
124070753 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain