Gene : Cagra.0096s0022 C. grandiflora v1.1
Defline:  (1 of 7) 1.14.11.33 - DNA oxidative demethylase / Alkylated DNA repair protein Genomic Order:  22
Name:  ? Cagra.0096s0022 Secondary Identifier:  ? PAC:28897003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0022 0.5kb upstream 0.5kb upstream 2347 true Scaffold96: 91128-93474 Capsella grandiflora
Cagra.0096s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 92975-93474 Capsella grandiflora
Cagra.0096s0022 0.5kb downstream 0.5kb downstream 2347 true Scaffold96: 90628-92974 Capsella grandiflora
Cagra.0096s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 90628-91127 Capsella grandiflora
Cagra.0096s0022 1.0kb upstream 1.0kb upstream 2847 true Scaffold96: 91128-93974 Capsella grandiflora
Cagra.0096s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 92975-93974 Capsella grandiflora
Cagra.0096s0022 1.0kb downstream 1.0kb downstream 2847 true Scaffold96: 90128-92974 Capsella grandiflora
Cagra.0096s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 90128-91127 Capsella grandiflora
Cagra.0096s0022 2.0kb upstream 2.0kb upstream 3847 true Scaffold96: 91128-94974 Capsella grandiflora
Cagra.0096s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 92975-94974 Capsella grandiflora
Cagra.0096s0022 2.0kb downstream 2.0kb downstream 3847 true Scaffold96: 89128-92974 Capsella grandiflora
Cagra.0096s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 89128-91127 Capsella grandiflora
Cagra.0096s0022 5.0kb upstream 5.0kb upstream 6847 true Scaffold96: 91128-97974 Capsella grandiflora
Cagra.0096s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 92975-97974 Capsella grandiflora
Cagra.0096s0022 5.0kb downstream 5.0kb downstream 6847 true Scaffold96: 86128-92974 Capsella grandiflora
Cagra.0096s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 86128-91127 Capsella grandiflora
Cagra.0096s0022 10.0kb upstream 10.0kb upstream 11847 true Scaffold96: 91128-102974 Capsella grandiflora
Cagra.0096s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 92975-102974 Capsella grandiflora
Cagra.0096s0022 10.0kb downstream 10.0kb downstream 11847 true Scaffold96: 81128-92974 Capsella grandiflora
Cagra.0096s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 81128-91127 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367715 5261 Brassicaceae View MSA
123838185 5264 Brassicales-Malvales View MSA
124339083 5266 SBM View MSA
124250387 5268 Malvidae View MSA
124064048 5270 Rosid View MSA
123745943 5271 Pentapetalae View MSA
122791019 5272 Eudicot View MSA
122045269 5273 Angiosperm View MSA
121344429 5274 Embryophyte View MSA
123426064 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain