Gene : Cagra.0096s0060 C. grandiflora v1.1
Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  60
Name:  ? Cagra.0096s0060 Secondary Identifier:  ? PAC:28896994
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0060 0.5kb upstream 0.5kb upstream 4366 true Scaffold96: 287720-292085 Capsella grandiflora
Cagra.0096s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 291586-292085 Capsella grandiflora
Cagra.0096s0060 0.5kb downstream 0.5kb downstream 4366 true Scaffold96: 287220-291585 Capsella grandiflora
Cagra.0096s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 287220-287719 Capsella grandiflora
Cagra.0096s0060 1.0kb upstream 1.0kb upstream 4866 true Scaffold96: 287720-292585 Capsella grandiflora
Cagra.0096s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 291586-292585 Capsella grandiflora
Cagra.0096s0060 1.0kb downstream 1.0kb downstream 4866 true Scaffold96: 286720-291585 Capsella grandiflora
Cagra.0096s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 286720-287719 Capsella grandiflora
Cagra.0096s0060 2.0kb upstream 2.0kb upstream 5866 true Scaffold96: 287720-293585 Capsella grandiflora
Cagra.0096s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 291586-293585 Capsella grandiflora
Cagra.0096s0060 2.0kb downstream 2.0kb downstream 5866 true Scaffold96: 285720-291585 Capsella grandiflora
Cagra.0096s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 285720-287719 Capsella grandiflora
Cagra.0096s0060 5.0kb upstream 5.0kb upstream 8866 true Scaffold96: 287720-296585 Capsella grandiflora
Cagra.0096s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 291586-296585 Capsella grandiflora
Cagra.0096s0060 5.0kb downstream 5.0kb downstream 8866 true Scaffold96: 282720-291585 Capsella grandiflora
Cagra.0096s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 282720-287719 Capsella grandiflora
Cagra.0096s0060 10.0kb upstream 10.0kb upstream 13866 true Scaffold96: 287720-301585 Capsella grandiflora
Cagra.0096s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 291586-301585 Capsella grandiflora
Cagra.0096s0060 10.0kb downstream 10.0kb downstream 13866 true Scaffold96: 277720-291585 Capsella grandiflora
Cagra.0096s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 277720-287719 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368019 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain