Gene : Cagra.0096s0063 C. grandiflora v1.1
Defline:  (1 of 1) KOG3483 - Uncharacterized conserved protein Genomic Order:  63
Name:  ? Cagra.0096s0063 Secondary Identifier:  ? PAC:28897010
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0063 0.5kb upstream 0.5kb upstream 1298 true Scaffold96: 304549-305846 Capsella grandiflora
Cagra.0096s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 305347-305846 Capsella grandiflora
Cagra.0096s0063 0.5kb downstream 0.5kb downstream 1298 true Scaffold96: 304049-305346 Capsella grandiflora
Cagra.0096s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 304049-304548 Capsella grandiflora
Cagra.0096s0063 1.0kb upstream 1.0kb upstream 1798 true Scaffold96: 304549-306346 Capsella grandiflora
Cagra.0096s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 305347-306346 Capsella grandiflora
Cagra.0096s0063 1.0kb downstream 1.0kb downstream 1798 true Scaffold96: 303549-305346 Capsella grandiflora
Cagra.0096s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 303549-304548 Capsella grandiflora
Cagra.0096s0063 2.0kb upstream 2.0kb upstream 2798 true Scaffold96: 304549-307346 Capsella grandiflora
Cagra.0096s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 305347-307346 Capsella grandiflora
Cagra.0096s0063 2.0kb downstream 2.0kb downstream 2798 true Scaffold96: 302549-305346 Capsella grandiflora
Cagra.0096s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 302549-304548 Capsella grandiflora
Cagra.0096s0063 5.0kb upstream 5.0kb upstream 5798 true Scaffold96: 304549-310346 Capsella grandiflora
Cagra.0096s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 305347-310346 Capsella grandiflora
Cagra.0096s0063 5.0kb downstream 5.0kb downstream 5798 true Scaffold96: 299549-305346 Capsella grandiflora
Cagra.0096s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 299549-304548 Capsella grandiflora
Cagra.0096s0063 10.0kb upstream 10.0kb upstream 10798 true Scaffold96: 304549-315346 Capsella grandiflora
Cagra.0096s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 305347-315346 Capsella grandiflora
Cagra.0096s0063 10.0kb downstream 10.0kb downstream 10798 true Scaffold96: 294549-305346 Capsella grandiflora
Cagra.0096s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 294549-304548 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334529 5261 Brassicaceae Singleton cluster - no MSA
123837821 5264 Brassicales-Malvales View MSA
124338630 5266 SBM View MSA
124248057 5268 Malvidae View MSA
124063457 5270 Rosid View MSA
123747070 5271 Pentapetalae View MSA
122791547 5272 Eudicot View MSA
122045527 5273 Angiosperm View MSA
121349624 5274 Embryophyte View MSA
123424259 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain