Gene : Cagra.0094s0029 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12398 - PROTEIN PHOSPHATASE INHIBITOR Genomic Order:  29
Name:  ? Cagra.0094s0029 Secondary Identifier:  ? PAC:28912389
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0094s0029 0.5kb upstream 0.5kb upstream 2604 true Scaffold94: 109803-112406 Capsella grandiflora
Cagra.0094s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold94: 111907-112406 Capsella grandiflora
Cagra.0094s0029 0.5kb downstream 0.5kb downstream 2604 true Scaffold94: 109303-111906 Capsella grandiflora
Cagra.0094s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold94: 109303-109802 Capsella grandiflora
Cagra.0094s0029 1.0kb upstream 1.0kb upstream 3104 true Scaffold94: 109803-112906 Capsella grandiflora
Cagra.0094s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold94: 111907-112906 Capsella grandiflora
Cagra.0094s0029 1.0kb downstream 1.0kb downstream 3104 true Scaffold94: 108803-111906 Capsella grandiflora
Cagra.0094s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold94: 108803-109802 Capsella grandiflora
Cagra.0094s0029 2.0kb upstream 2.0kb upstream 4104 true Scaffold94: 109803-113906 Capsella grandiflora
Cagra.0094s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold94: 111907-113906 Capsella grandiflora
Cagra.0094s0029 2.0kb downstream 2.0kb downstream 4104 true Scaffold94: 107803-111906 Capsella grandiflora
Cagra.0094s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold94: 107803-109802 Capsella grandiflora
Cagra.0094s0029 5.0kb upstream 5.0kb upstream 7104 true Scaffold94: 109803-116906 Capsella grandiflora
Cagra.0094s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold94: 111907-116906 Capsella grandiflora
Cagra.0094s0029 5.0kb downstream 5.0kb downstream 7104 true Scaffold94: 104803-111906 Capsella grandiflora
Cagra.0094s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold94: 104803-109802 Capsella grandiflora
Cagra.0094s0029 10.0kb upstream 10.0kb upstream 12104 true Scaffold94: 109803-121906 Capsella grandiflora
Cagra.0094s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold94: 111907-121906 Capsella grandiflora
Cagra.0094s0029 10.0kb downstream 10.0kb downstream 12104 true Scaffold94: 99803-111906 Capsella grandiflora
Cagra.0094s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold94: 99803-109802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363806 5261 Brassicaceae View MSA
123838058 5264 Brassicales-Malvales View MSA
124337910 5266 SBM View MSA
124244929 5268 Malvidae View MSA
124061983 5270 Rosid View MSA
123745681 5271 Pentapetalae View MSA
122786905 5272 Eudicot View MSA
122042878 5273 Angiosperm View MSA
121350787 5274 Embryophyte View MSA
123381884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain