Gene : Cagra.0316s0028 C. grandiflora v1.1
Defline:  (1 of 75) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase Genomic Order:  28
Name:  ? Cagra.0316s0028 Secondary Identifier:  ? PAC:28915616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0028 0.5kb upstream 0.5kb upstream 1627 true Scaffold316: 116021-117647 Capsella grandiflora
Cagra.0316s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 116021-116520 Capsella grandiflora
Cagra.0316s0028 0.5kb downstream 0.5kb downstream 1627 true Scaffold316: 116521-118147 Capsella grandiflora
Cagra.0316s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 117648-118147 Capsella grandiflora
Cagra.0316s0028 1.0kb upstream 1.0kb upstream 2127 true Scaffold316: 115521-117647 Capsella grandiflora
Cagra.0316s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 115521-116520 Capsella grandiflora
Cagra.0316s0028 1.0kb downstream 1.0kb downstream 2127 true Scaffold316: 116521-118647 Capsella grandiflora
Cagra.0316s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 117648-118647 Capsella grandiflora
Cagra.0316s0028 2.0kb upstream 2.0kb upstream 3127 true Scaffold316: 114521-117647 Capsella grandiflora
Cagra.0316s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 114521-116520 Capsella grandiflora
Cagra.0316s0028 2.0kb downstream 2.0kb downstream 3127 true Scaffold316: 116521-119647 Capsella grandiflora
Cagra.0316s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 117648-119647 Capsella grandiflora
Cagra.0316s0028 5.0kb upstream 5.0kb upstream 6127 true Scaffold316: 111521-117647 Capsella grandiflora
Cagra.0316s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 111521-116520 Capsella grandiflora
Cagra.0316s0028 5.0kb downstream 5.0kb downstream 6127 true Scaffold316: 116521-122647 Capsella grandiflora
Cagra.0316s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 117648-122647 Capsella grandiflora
Cagra.0316s0028 10.0kb upstream 10.0kb upstream 11127 true Scaffold316: 106521-117647 Capsella grandiflora
Cagra.0316s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 106521-116520 Capsella grandiflora
Cagra.0316s0028 10.0kb downstream 10.0kb downstream 11127 true Scaffold316: 116521-127647 Capsella grandiflora
Cagra.0316s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 117648-127647 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122333496 5261 Brassicaceae Singleton cluster - no MSA
123774433 5264 Brassicales-Malvales Singleton cluster - no MSA
124351866 5266 SBM View MSA
124181203 5268 Malvidae View MSA
123903154 5270 Rosid View MSA
123756817 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain