Gene : Cagra.0301s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31614:SF15 - ARABINOGALACTAN PROTEIN 30-RELATED Genomic Order:  1
Name:  ? Cagra.0301s0001 Secondary Identifier:  ? PAC:28907879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0001 0.5kb upstream 0.5kb upstream 1505 true Scaffold301: 1540-3044 Capsella grandiflora
Cagra.0301s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 1540-2039 Capsella grandiflora
Cagra.0301s0001 0.5kb downstream 0.5kb downstream 1505 true Scaffold301: 2040-3544 Capsella grandiflora
Cagra.0301s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 3045-3544 Capsella grandiflora
Cagra.0301s0001 1.0kb upstream 1.0kb upstream 2005 true Scaffold301: 1040-3044 Capsella grandiflora
Cagra.0301s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 1040-2039 Capsella grandiflora
Cagra.0301s0001 1.0kb downstream 1.0kb downstream 2005 true Scaffold301: 2040-4044 Capsella grandiflora
Cagra.0301s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 3045-4044 Capsella grandiflora
Cagra.0301s0001 2.0kb upstream 2.0kb upstream 3005 true Scaffold301: 40-3044 Capsella grandiflora
Cagra.0301s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 40-2039 Capsella grandiflora
Cagra.0301s0001 2.0kb downstream 2.0kb downstream 3005 true Scaffold301: 2040-5044 Capsella grandiflora
Cagra.0301s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 3045-5044 Capsella grandiflora
Cagra.0301s0001 5.0kb upstream 5.0kb upstream 3044 true Scaffold301: 1-3044 Capsella grandiflora
Cagra.0301s0001 5.0kb upstream 5.0kb upstream 2039 false Scaffold301: 1-2039 Capsella grandiflora
Cagra.0301s0001 5.0kb downstream 5.0kb downstream 6005 true Scaffold301: 2040-8044 Capsella grandiflora
Cagra.0301s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 3045-8044 Capsella grandiflora
Cagra.0301s0001 10.0kb upstream 10.0kb upstream 3044 true Scaffold301: 1-3044 Capsella grandiflora
Cagra.0301s0001 10.0kb upstream 10.0kb upstream 2039 false Scaffold301: 1-2039 Capsella grandiflora
Cagra.0301s0001 10.0kb downstream 10.0kb downstream 11005 true Scaffold301: 2040-13044 Capsella grandiflora
Cagra.0301s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 3045-13044 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363708 5261 Brassicaceae View MSA
123838272 5264 Brassicales-Malvales View MSA
124322426 5266 SBM View MSA
124248065 5268 Malvidae View MSA
124066868 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain