Gene : Cagra.0301s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23419 - DIVALENT CATION TOLERANCE CUTA-RELATED Genomic Order:  8
Name:  ? Cagra.0301s0008 Secondary Identifier:  ? PAC:28907859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0008 0.5kb upstream 0.5kb upstream 2459 true Scaffold301: 26348-28806 Capsella grandiflora
Cagra.0301s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 28307-28806 Capsella grandiflora
Cagra.0301s0008 0.5kb downstream 0.5kb downstream 2459 true Scaffold301: 25848-28306 Capsella grandiflora
Cagra.0301s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 25848-26347 Capsella grandiflora
Cagra.0301s0008 1.0kb upstream 1.0kb upstream 2959 true Scaffold301: 26348-29306 Capsella grandiflora
Cagra.0301s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 28307-29306 Capsella grandiflora
Cagra.0301s0008 1.0kb downstream 1.0kb downstream 2959 true Scaffold301: 25348-28306 Capsella grandiflora
Cagra.0301s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 25348-26347 Capsella grandiflora
Cagra.0301s0008 2.0kb upstream 2.0kb upstream 3959 true Scaffold301: 26348-30306 Capsella grandiflora
Cagra.0301s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 28307-30306 Capsella grandiflora
Cagra.0301s0008 2.0kb downstream 2.0kb downstream 3959 true Scaffold301: 24348-28306 Capsella grandiflora
Cagra.0301s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 24348-26347 Capsella grandiflora
Cagra.0301s0008 5.0kb upstream 5.0kb upstream 6959 true Scaffold301: 26348-33306 Capsella grandiflora
Cagra.0301s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 28307-33306 Capsella grandiflora
Cagra.0301s0008 5.0kb downstream 5.0kb downstream 6959 true Scaffold301: 21348-28306 Capsella grandiflora
Cagra.0301s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 21348-26347 Capsella grandiflora
Cagra.0301s0008 10.0kb upstream 10.0kb upstream 11959 true Scaffold301: 26348-38306 Capsella grandiflora
Cagra.0301s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 28307-38306 Capsella grandiflora
Cagra.0301s0008 10.0kb downstream 10.0kb downstream 11959 true Scaffold301: 16348-28306 Capsella grandiflora
Cagra.0301s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 16348-26347 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371930 5261 Brassicaceae View MSA
123829348 5264 Brassicales-Malvales View MSA
124346066 5266 SBM View MSA
124240619 5268 Malvidae View MSA
124065132 5270 Rosid View MSA
123737980 5271 Pentapetalae View MSA
122793088 5272 Eudicot View MSA
122046469 5273 Angiosperm View MSA
121350937 5274 Embryophyte View MSA
123425667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain