Gene : Cagra.0301s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31280:SF1 - F19P19.6 PROTEIN Genomic Order:  40
Name:  ? Cagra.0301s0040 Secondary Identifier:  ? PAC:28907798
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0040 0.5kb upstream 0.5kb upstream 4029 true Scaffold301: 137372-141400 Capsella grandiflora
Cagra.0301s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 140901-141400 Capsella grandiflora
Cagra.0301s0040 0.5kb downstream 0.5kb downstream 4029 true Scaffold301: 136872-140900 Capsella grandiflora
Cagra.0301s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 136872-137371 Capsella grandiflora
Cagra.0301s0040 1.0kb upstream 1.0kb upstream 4529 true Scaffold301: 137372-141900 Capsella grandiflora
Cagra.0301s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 140901-141900 Capsella grandiflora
Cagra.0301s0040 1.0kb downstream 1.0kb downstream 4529 true Scaffold301: 136372-140900 Capsella grandiflora
Cagra.0301s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 136372-137371 Capsella grandiflora
Cagra.0301s0040 2.0kb upstream 2.0kb upstream 5529 true Scaffold301: 137372-142900 Capsella grandiflora
Cagra.0301s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 140901-142900 Capsella grandiflora
Cagra.0301s0040 2.0kb downstream 2.0kb downstream 5529 true Scaffold301: 135372-140900 Capsella grandiflora
Cagra.0301s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 135372-137371 Capsella grandiflora
Cagra.0301s0040 5.0kb upstream 5.0kb upstream 8529 true Scaffold301: 137372-145900 Capsella grandiflora
Cagra.0301s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 140901-145900 Capsella grandiflora
Cagra.0301s0040 5.0kb downstream 5.0kb downstream 8529 true Scaffold301: 132372-140900 Capsella grandiflora
Cagra.0301s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 132372-137371 Capsella grandiflora
Cagra.0301s0040 10.0kb upstream 10.0kb upstream 13529 true Scaffold301: 137372-150900 Capsella grandiflora
Cagra.0301s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 140901-150900 Capsella grandiflora
Cagra.0301s0040 10.0kb downstream 10.0kb downstream 13529 true Scaffold301: 127372-140900 Capsella grandiflora
Cagra.0301s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 127372-137371 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375557 5261 Brassicaceae View MSA
123838903 5264 Brassicales-Malvales View MSA
124340433 5266 SBM View MSA
124251535 5268 Malvidae View MSA
124064567 5270 Rosid View MSA
123739737 5271 Pentapetalae View MSA
122788845 5272 Eudicot View MSA
122044246 5273 Angiosperm View MSA
121310260 5274 Embryophyte View MSA
123347799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain