Gene : Cagra.0301s0047 C. grandiflora v1.1
Defline:  (1 of 8) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  47
Name:  ? Cagra.0301s0047 Secondary Identifier:  ? PAC:28907791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0047 0.5kb upstream 0.5kb upstream 3837 true Scaffold301: 157055-160891 Capsella grandiflora
Cagra.0301s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 160392-160891 Capsella grandiflora
Cagra.0301s0047 0.5kb downstream 0.5kb downstream 3837 true Scaffold301: 156555-160391 Capsella grandiflora
Cagra.0301s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 156555-157054 Capsella grandiflora
Cagra.0301s0047 1.0kb upstream 1.0kb upstream 4337 true Scaffold301: 157055-161391 Capsella grandiflora
Cagra.0301s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 160392-161391 Capsella grandiflora
Cagra.0301s0047 1.0kb downstream 1.0kb downstream 4337 true Scaffold301: 156055-160391 Capsella grandiflora
Cagra.0301s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 156055-157054 Capsella grandiflora
Cagra.0301s0047 2.0kb upstream 2.0kb upstream 5337 true Scaffold301: 157055-162391 Capsella grandiflora
Cagra.0301s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 160392-162391 Capsella grandiflora
Cagra.0301s0047 2.0kb downstream 2.0kb downstream 5337 true Scaffold301: 155055-160391 Capsella grandiflora
Cagra.0301s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 155055-157054 Capsella grandiflora
Cagra.0301s0047 5.0kb upstream 5.0kb upstream 8337 true Scaffold301: 157055-165391 Capsella grandiflora
Cagra.0301s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 160392-165391 Capsella grandiflora
Cagra.0301s0047 5.0kb downstream 5.0kb downstream 8337 true Scaffold301: 152055-160391 Capsella grandiflora
Cagra.0301s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 152055-157054 Capsella grandiflora
Cagra.0301s0047 10.0kb upstream 10.0kb upstream 13337 true Scaffold301: 157055-170391 Capsella grandiflora
Cagra.0301s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 160392-170391 Capsella grandiflora
Cagra.0301s0047 10.0kb downstream 10.0kb downstream 13337 true Scaffold301: 147055-160391 Capsella grandiflora
Cagra.0301s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 147055-157054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377060 5261 Brassicaceae View MSA
123836019 5264 Brassicales-Malvales View MSA
124345215 5266 SBM View MSA
124241031 5268 Malvidae View MSA
124067642 5270 Rosid View MSA
123738704 5271 Pentapetalae View MSA
122792480 5272 Eudicot View MSA
122045948 5273 Angiosperm View MSA
121310528 5274 Embryophyte View MSA
123347988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain