Gene : Cagra.0301s0086 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  86
Name:  ? Cagra.0301s0086 Secondary Identifier:  ? PAC:28907884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0086 0.5kb upstream 0.5kb upstream 6289 true Scaffold301: 322227-328515 Capsella grandiflora
Cagra.0301s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 328016-328515 Capsella grandiflora
Cagra.0301s0086 0.5kb downstream 0.5kb downstream 6289 true Scaffold301: 321727-328015 Capsella grandiflora
Cagra.0301s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 321727-322226 Capsella grandiflora
Cagra.0301s0086 1.0kb upstream 1.0kb upstream 6789 true Scaffold301: 322227-329015 Capsella grandiflora
Cagra.0301s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 328016-329015 Capsella grandiflora
Cagra.0301s0086 1.0kb downstream 1.0kb downstream 6789 true Scaffold301: 321227-328015 Capsella grandiflora
Cagra.0301s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 321227-322226 Capsella grandiflora
Cagra.0301s0086 2.0kb upstream 2.0kb upstream 7789 true Scaffold301: 322227-330015 Capsella grandiflora
Cagra.0301s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 328016-330015 Capsella grandiflora
Cagra.0301s0086 2.0kb downstream 2.0kb downstream 7789 true Scaffold301: 320227-328015 Capsella grandiflora
Cagra.0301s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 320227-322226 Capsella grandiflora
Cagra.0301s0086 5.0kb upstream 5.0kb upstream 10789 true Scaffold301: 322227-333015 Capsella grandiflora
Cagra.0301s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 328016-333015 Capsella grandiflora
Cagra.0301s0086 5.0kb downstream 5.0kb downstream 10789 true Scaffold301: 317227-328015 Capsella grandiflora
Cagra.0301s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 317227-322226 Capsella grandiflora
Cagra.0301s0086 10.0kb upstream 10.0kb upstream 15789 true Scaffold301: 322227-338015 Capsella grandiflora
Cagra.0301s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 328016-338015 Capsella grandiflora
Cagra.0301s0086 10.0kb downstream 10.0kb downstream 15789 true Scaffold301: 312227-328015 Capsella grandiflora
Cagra.0301s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 312227-322226 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364675 5261 Brassicaceae View MSA
123832054 5264 Brassicales-Malvales View MSA
124341887 5266 SBM View MSA
124240540 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain