Gene : Cagra.0263s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  11
Name:  ? Cagra.0263s0011 Secondary Identifier:  ? PAC:28913127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0263s0011 0.5kb upstream 0.5kb upstream 3488 true Scaffold263: 25414-28901 Capsella grandiflora
Cagra.0263s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold263: 25414-25913 Capsella grandiflora
Cagra.0263s0011 0.5kb downstream 0.5kb downstream 3488 true Scaffold263: 25914-29401 Capsella grandiflora
Cagra.0263s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold263: 28902-29401 Capsella grandiflora
Cagra.0263s0011 1.0kb upstream 1.0kb upstream 3988 true Scaffold263: 24914-28901 Capsella grandiflora
Cagra.0263s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold263: 24914-25913 Capsella grandiflora
Cagra.0263s0011 1.0kb downstream 1.0kb downstream 3988 true Scaffold263: 25914-29901 Capsella grandiflora
Cagra.0263s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold263: 28902-29901 Capsella grandiflora
Cagra.0263s0011 2.0kb upstream 2.0kb upstream 4988 true Scaffold263: 23914-28901 Capsella grandiflora
Cagra.0263s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold263: 23914-25913 Capsella grandiflora
Cagra.0263s0011 2.0kb downstream 2.0kb downstream 4988 true Scaffold263: 25914-30901 Capsella grandiflora
Cagra.0263s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold263: 28902-30901 Capsella grandiflora
Cagra.0263s0011 5.0kb upstream 5.0kb upstream 7988 true Scaffold263: 20914-28901 Capsella grandiflora
Cagra.0263s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold263: 20914-25913 Capsella grandiflora
Cagra.0263s0011 5.0kb downstream 5.0kb downstream 7988 true Scaffold263: 25914-33901 Capsella grandiflora
Cagra.0263s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold263: 28902-33901 Capsella grandiflora
Cagra.0263s0011 10.0kb upstream 10.0kb upstream 12988 true Scaffold263: 15914-28901 Capsella grandiflora
Cagra.0263s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold263: 15914-25913 Capsella grandiflora
Cagra.0263s0011 10.0kb downstream 10.0kb downstream 12988 true Scaffold263: 25914-38901 Capsella grandiflora
Cagra.0263s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold263: 28902-38901 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369237 5261 Brassicaceae View MSA
123830156 5264 Brassicales-Malvales View MSA
124342128 5266 SBM View MSA
124249848 5268 Malvidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain