Gene : Cagra.0277s0029 C. grandiflora v1.1
Defline:  (1 of 9) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  29
Name:  ? Cagra.0277s0029 Secondary Identifier:  ? PAC:28911251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0277s0029 0.5kb upstream 0.5kb upstream 2552 true Scaffold277: 130316-132867 Capsella grandiflora
Cagra.0277s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold277: 130316-130815 Capsella grandiflora
Cagra.0277s0029 0.5kb downstream 0.5kb downstream 2552 true Scaffold277: 130816-133367 Capsella grandiflora
Cagra.0277s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold277: 132868-133367 Capsella grandiflora
Cagra.0277s0029 1.0kb upstream 1.0kb upstream 3052 true Scaffold277: 129816-132867 Capsella grandiflora
Cagra.0277s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold277: 129816-130815 Capsella grandiflora
Cagra.0277s0029 1.0kb downstream 1.0kb downstream 3052 true Scaffold277: 130816-133867 Capsella grandiflora
Cagra.0277s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold277: 132868-133867 Capsella grandiflora
Cagra.0277s0029 2.0kb upstream 2.0kb upstream 4052 true Scaffold277: 128816-132867 Capsella grandiflora
Cagra.0277s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold277: 128816-130815 Capsella grandiflora
Cagra.0277s0029 2.0kb downstream 2.0kb downstream 4052 true Scaffold277: 130816-134867 Capsella grandiflora
Cagra.0277s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold277: 132868-134867 Capsella grandiflora
Cagra.0277s0029 5.0kb upstream 5.0kb upstream 7052 true Scaffold277: 125816-132867 Capsella grandiflora
Cagra.0277s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold277: 125816-130815 Capsella grandiflora
Cagra.0277s0029 5.0kb downstream 5.0kb downstream 7052 true Scaffold277: 130816-137867 Capsella grandiflora
Cagra.0277s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold277: 132868-137867 Capsella grandiflora
Cagra.0277s0029 10.0kb upstream 10.0kb upstream 12052 true Scaffold277: 120816-132867 Capsella grandiflora
Cagra.0277s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold277: 120816-130815 Capsella grandiflora
Cagra.0277s0029 10.0kb downstream 10.0kb downstream 12052 true Scaffold277: 130816-142867 Capsella grandiflora
Cagra.0277s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold277: 132868-142867 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377696 5261 Brassicaceae View MSA
123801606 5264 Brassicales-Malvales View MSA
124298886 5266 SBM View MSA
124150427 5268 Malvidae View MSA
124062054 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain