Gene : Cagra.0248s0119 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23088:SF9 - BETA-UREIDOPROPIONASE Genomic Order:  119
Name:  ? Cagra.0248s0119 Secondary Identifier:  ? PAC:28918944
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3982 Capsella grandiflora pathologic  
Cgrandiflora PWY-6430 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0119 0.5kb upstream 0.5kb upstream 2486 true Scaffold248: 417964-420449 Capsella grandiflora
Cagra.0248s0119 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 417964-418463 Capsella grandiflora
Cagra.0248s0119 0.5kb downstream 0.5kb downstream 2486 true Scaffold248: 418464-420949 Capsella grandiflora
Cagra.0248s0119 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 420450-420949 Capsella grandiflora
Cagra.0248s0119 1.0kb upstream 1.0kb upstream 2986 true Scaffold248: 417464-420449 Capsella grandiflora
Cagra.0248s0119 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 417464-418463 Capsella grandiflora
Cagra.0248s0119 1.0kb downstream 1.0kb downstream 2986 true Scaffold248: 418464-421449 Capsella grandiflora
Cagra.0248s0119 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 420450-421449 Capsella grandiflora
Cagra.0248s0119 2.0kb upstream 2.0kb upstream 3986 true Scaffold248: 416464-420449 Capsella grandiflora
Cagra.0248s0119 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 416464-418463 Capsella grandiflora
Cagra.0248s0119 2.0kb downstream 2.0kb downstream 3986 true Scaffold248: 418464-422449 Capsella grandiflora
Cagra.0248s0119 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 420450-422449 Capsella grandiflora
Cagra.0248s0119 5.0kb upstream 5.0kb upstream 6986 true Scaffold248: 413464-420449 Capsella grandiflora
Cagra.0248s0119 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 413464-418463 Capsella grandiflora
Cagra.0248s0119 5.0kb downstream 5.0kb downstream 6986 true Scaffold248: 418464-425449 Capsella grandiflora
Cagra.0248s0119 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 420450-425449 Capsella grandiflora
Cagra.0248s0119 10.0kb upstream 10.0kb upstream 11986 true Scaffold248: 408464-420449 Capsella grandiflora
Cagra.0248s0119 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 408464-418463 Capsella grandiflora
Cagra.0248s0119 10.0kb downstream 10.0kb downstream 11986 true Scaffold248: 418464-430449 Capsella grandiflora
Cagra.0248s0119 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 420450-430449 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364863 5261 Brassicaceae View MSA
123839768 5264 Brassicales-Malvales View MSA
124343031 5266 SBM View MSA
124241093 5268 Malvidae View MSA
124062132 5270 Rosid View MSA
123750342 5271 Pentapetalae View MSA
122790963 5272 Eudicot View MSA
122045387 5273 Angiosperm View MSA
121345215 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain