Gene : Cagra.0248s0011 C. grandiflora v1.1
Defline:  (1 of 1) 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Genomic Order:  11
Name:  ? Cagra.0248s0011 Secondary Identifier:  ? PAC:28918875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0011 0.5kb upstream 0.5kb upstream 2079 true Scaffold248: 31917-33995 Capsella grandiflora
Cagra.0248s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 33496-33995 Capsella grandiflora
Cagra.0248s0011 0.5kb downstream 0.5kb downstream 2079 true Scaffold248: 31417-33495 Capsella grandiflora
Cagra.0248s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 31417-31916 Capsella grandiflora
Cagra.0248s0011 1.0kb upstream 1.0kb upstream 2579 true Scaffold248: 31917-34495 Capsella grandiflora
Cagra.0248s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 33496-34495 Capsella grandiflora
Cagra.0248s0011 1.0kb downstream 1.0kb downstream 2579 true Scaffold248: 30917-33495 Capsella grandiflora
Cagra.0248s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 30917-31916 Capsella grandiflora
Cagra.0248s0011 2.0kb upstream 2.0kb upstream 3579 true Scaffold248: 31917-35495 Capsella grandiflora
Cagra.0248s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 33496-35495 Capsella grandiflora
Cagra.0248s0011 2.0kb downstream 2.0kb downstream 3579 true Scaffold248: 29917-33495 Capsella grandiflora
Cagra.0248s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 29917-31916 Capsella grandiflora
Cagra.0248s0011 5.0kb upstream 5.0kb upstream 6579 true Scaffold248: 31917-38495 Capsella grandiflora
Cagra.0248s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 33496-38495 Capsella grandiflora
Cagra.0248s0011 5.0kb downstream 5.0kb downstream 6579 true Scaffold248: 26917-33495 Capsella grandiflora
Cagra.0248s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 26917-31916 Capsella grandiflora
Cagra.0248s0011 10.0kb upstream 10.0kb upstream 11579 true Scaffold248: 31917-43495 Capsella grandiflora
Cagra.0248s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 33496-43495 Capsella grandiflora
Cagra.0248s0011 10.0kb downstream 10.0kb downstream 11579 true Scaffold248: 21917-33495 Capsella grandiflora
Cagra.0248s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 21917-31916 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365285 5261 Brassicaceae View MSA
123829433 5264 Brassicales-Malvales View MSA
124345957 5266 SBM View MSA
124238028 5268 Malvidae View MSA
124062342 5270 Rosid View MSA
123740173 5271 Pentapetalae View MSA
122786223 5272 Eudicot View MSA
122048362 5273 Angiosperm View MSA
121344861 5274 Embryophyte View MSA
123424755 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain