Gene : Cagra.0248s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  23
Name:  ? Cagra.0248s0023 Secondary Identifier:  ? PAC:28918902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0023 0.5kb upstream 0.5kb upstream 2600 true Scaffold248: 75389-77988 Capsella grandiflora
Cagra.0248s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 77489-77988 Capsella grandiflora
Cagra.0248s0023 0.5kb downstream 0.5kb downstream 2600 true Scaffold248: 74889-77488 Capsella grandiflora
Cagra.0248s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 74889-75388 Capsella grandiflora
Cagra.0248s0023 1.0kb upstream 1.0kb upstream 3100 true Scaffold248: 75389-78488 Capsella grandiflora
Cagra.0248s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 77489-78488 Capsella grandiflora
Cagra.0248s0023 1.0kb downstream 1.0kb downstream 3100 true Scaffold248: 74389-77488 Capsella grandiflora
Cagra.0248s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 74389-75388 Capsella grandiflora
Cagra.0248s0023 2.0kb upstream 2.0kb upstream 4100 true Scaffold248: 75389-79488 Capsella grandiflora
Cagra.0248s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 77489-79488 Capsella grandiflora
Cagra.0248s0023 2.0kb downstream 2.0kb downstream 4100 true Scaffold248: 73389-77488 Capsella grandiflora
Cagra.0248s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 73389-75388 Capsella grandiflora
Cagra.0248s0023 5.0kb upstream 5.0kb upstream 7100 true Scaffold248: 75389-82488 Capsella grandiflora
Cagra.0248s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 77489-82488 Capsella grandiflora
Cagra.0248s0023 5.0kb downstream 5.0kb downstream 7100 true Scaffold248: 70389-77488 Capsella grandiflora
Cagra.0248s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 70389-75388 Capsella grandiflora
Cagra.0248s0023 10.0kb upstream 10.0kb upstream 12100 true Scaffold248: 75389-87488 Capsella grandiflora
Cagra.0248s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 77489-87488 Capsella grandiflora
Cagra.0248s0023 10.0kb downstream 10.0kb downstream 12100 true Scaffold248: 65389-77488 Capsella grandiflora
Cagra.0248s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 65389-75388 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370021 5261 Brassicaceae View MSA
123837282 5264 Brassicales-Malvales View MSA
124342151 5266 SBM View MSA
124243029 5268 Malvidae View MSA
124066068 5270 Rosid View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain