Gene : Cagra.0239s0044 C. grandiflora v1.1
Defline:  (1 of 3) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  44
Name:  ? Cagra.0239s0044 Secondary Identifier:  ? PAC:28915485
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0044 0.5kb upstream 0.5kb upstream 2560 true Scaffold239: 149281-151840 Capsella grandiflora
Cagra.0239s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 149281-149780 Capsella grandiflora
Cagra.0239s0044 0.5kb downstream 0.5kb downstream 2560 true Scaffold239: 149781-152340 Capsella grandiflora
Cagra.0239s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 151841-152340 Capsella grandiflora
Cagra.0239s0044 1.0kb upstream 1.0kb upstream 3060 true Scaffold239: 148781-151840 Capsella grandiflora
Cagra.0239s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 148781-149780 Capsella grandiflora
Cagra.0239s0044 1.0kb downstream 1.0kb downstream 3060 true Scaffold239: 149781-152840 Capsella grandiflora
Cagra.0239s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 151841-152840 Capsella grandiflora
Cagra.0239s0044 2.0kb upstream 2.0kb upstream 4060 true Scaffold239: 147781-151840 Capsella grandiflora
Cagra.0239s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 147781-149780 Capsella grandiflora
Cagra.0239s0044 2.0kb downstream 2.0kb downstream 4060 true Scaffold239: 149781-153840 Capsella grandiflora
Cagra.0239s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 151841-153840 Capsella grandiflora
Cagra.0239s0044 5.0kb upstream 5.0kb upstream 7060 true Scaffold239: 144781-151840 Capsella grandiflora
Cagra.0239s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 144781-149780 Capsella grandiflora
Cagra.0239s0044 5.0kb downstream 5.0kb downstream 7060 true Scaffold239: 149781-156840 Capsella grandiflora
Cagra.0239s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 151841-156840 Capsella grandiflora
Cagra.0239s0044 10.0kb upstream 10.0kb upstream 12060 true Scaffold239: 139781-151840 Capsella grandiflora
Cagra.0239s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 139781-149780 Capsella grandiflora
Cagra.0239s0044 10.0kb downstream 10.0kb downstream 12060 true Scaffold239: 149781-161840 Capsella grandiflora
Cagra.0239s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 151841-161840 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372703 5261 Brassicaceae View MSA
123830940 5264 Brassicales-Malvales View MSA
124347374 5266 SBM View MSA
124237000 5268 Malvidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain