Gene : Cagra.0239s0053 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12084 - NUCLEAR PORE GLYCOPROTEIN P62-RELATED Genomic Order:  53
Name:  ? Cagra.0239s0053 Secondary Identifier:  ? PAC:28915460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0053 0.5kb upstream 0.5kb upstream 4332 true Scaffold239: 189400-193731 Capsella grandiflora
Cagra.0239s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 189400-189899 Capsella grandiflora
Cagra.0239s0053 0.5kb downstream 0.5kb downstream 4332 true Scaffold239: 189900-194231 Capsella grandiflora
Cagra.0239s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 193732-194231 Capsella grandiflora
Cagra.0239s0053 1.0kb upstream 1.0kb upstream 4832 true Scaffold239: 188900-193731 Capsella grandiflora
Cagra.0239s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 188900-189899 Capsella grandiflora
Cagra.0239s0053 1.0kb downstream 1.0kb downstream 4832 true Scaffold239: 189900-194731 Capsella grandiflora
Cagra.0239s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 193732-194731 Capsella grandiflora
Cagra.0239s0053 2.0kb upstream 2.0kb upstream 5832 true Scaffold239: 187900-193731 Capsella grandiflora
Cagra.0239s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 187900-189899 Capsella grandiflora
Cagra.0239s0053 2.0kb downstream 2.0kb downstream 5832 true Scaffold239: 189900-195731 Capsella grandiflora
Cagra.0239s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 193732-195731 Capsella grandiflora
Cagra.0239s0053 5.0kb upstream 5.0kb upstream 8832 true Scaffold239: 184900-193731 Capsella grandiflora
Cagra.0239s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 184900-189899 Capsella grandiflora
Cagra.0239s0053 5.0kb downstream 5.0kb downstream 8832 true Scaffold239: 189900-198731 Capsella grandiflora
Cagra.0239s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 193732-198731 Capsella grandiflora
Cagra.0239s0053 10.0kb upstream 10.0kb upstream 13832 true Scaffold239: 179900-193731 Capsella grandiflora
Cagra.0239s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 179900-189899 Capsella grandiflora
Cagra.0239s0053 10.0kb downstream 10.0kb downstream 13832 true Scaffold239: 189900-203731 Capsella grandiflora
Cagra.0239s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 193732-203731 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371838 5261 Brassicaceae View MSA
123829169 5264 Brassicales-Malvales View MSA
124344186 5266 SBM View MSA
124237099 5268 Malvidae View MSA
124066082 5270 Rosid View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain