Gene : Cagra.0216s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11042:SF96 - SERINE/THREONINE-PROTEIN KINASE GCN2-RELATED Genomic Order:  44
Name:  ? Cagra.0216s0044 Secondary Identifier:  ? PAC:28914389
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0044 0.5kb upstream 0.5kb upstream 9280 true Scaffold216: 170051-179330 Capsella grandiflora
Cagra.0216s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 170051-170550 Capsella grandiflora
Cagra.0216s0044 0.5kb downstream 0.5kb downstream 9280 true Scaffold216: 170551-179830 Capsella grandiflora
Cagra.0216s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 179331-179830 Capsella grandiflora
Cagra.0216s0044 1.0kb upstream 1.0kb upstream 9780 true Scaffold216: 169551-179330 Capsella grandiflora
Cagra.0216s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 169551-170550 Capsella grandiflora
Cagra.0216s0044 1.0kb downstream 1.0kb downstream 9780 true Scaffold216: 170551-180330 Capsella grandiflora
Cagra.0216s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 179331-180330 Capsella grandiflora
Cagra.0216s0044 2.0kb upstream 2.0kb upstream 10780 true Scaffold216: 168551-179330 Capsella grandiflora
Cagra.0216s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 168551-170550 Capsella grandiflora
Cagra.0216s0044 2.0kb downstream 2.0kb downstream 10780 true Scaffold216: 170551-181330 Capsella grandiflora
Cagra.0216s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 179331-181330 Capsella grandiflora
Cagra.0216s0044 5.0kb upstream 5.0kb upstream 13780 true Scaffold216: 165551-179330 Capsella grandiflora
Cagra.0216s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 165551-170550 Capsella grandiflora
Cagra.0216s0044 5.0kb downstream 5.0kb downstream 13780 true Scaffold216: 170551-184330 Capsella grandiflora
Cagra.0216s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 179331-184330 Capsella grandiflora
Cagra.0216s0044 10.0kb upstream 10.0kb upstream 18780 true Scaffold216: 160551-179330 Capsella grandiflora
Cagra.0216s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 160551-170550 Capsella grandiflora
Cagra.0216s0044 10.0kb downstream 10.0kb downstream 18741 true Scaffold216: 170551-189291 Capsella grandiflora
Cagra.0216s0044 10.0kb downstream 10.0kb downstream 9961 false Scaffold216: 179331-189291 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374047 5261 Brassicaceae View MSA
123830452 5264 Brassicales-Malvales View MSA
124321675 5266 SBM View MSA
124242437 5268 Malvidae View MSA
124050438 5270 Rosid View MSA
123738209 5271 Pentapetalae View MSA
122791931 5272 Eudicot View MSA
122046632 5273 Angiosperm View MSA
121347424 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain