Gene : Cagra.0216s0034 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12276:SF45 - CLATHRIN INTERACTOR 1 Genomic Order:  34
Name:  ? Cagra.0216s0034 Secondary Identifier:  ? PAC:28914351
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0034 0.5kb upstream 0.5kb upstream 5998 true Scaffold216: 131266-137263 Capsella grandiflora
Cagra.0216s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 131266-131765 Capsella grandiflora
Cagra.0216s0034 0.5kb downstream 0.5kb downstream 5998 true Scaffold216: 131766-137763 Capsella grandiflora
Cagra.0216s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 137264-137763 Capsella grandiflora
Cagra.0216s0034 1.0kb upstream 1.0kb upstream 6498 true Scaffold216: 130766-137263 Capsella grandiflora
Cagra.0216s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 130766-131765 Capsella grandiflora
Cagra.0216s0034 1.0kb downstream 1.0kb downstream 6498 true Scaffold216: 131766-138263 Capsella grandiflora
Cagra.0216s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 137264-138263 Capsella grandiflora
Cagra.0216s0034 2.0kb upstream 2.0kb upstream 7498 true Scaffold216: 129766-137263 Capsella grandiflora
Cagra.0216s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 129766-131765 Capsella grandiflora
Cagra.0216s0034 2.0kb downstream 2.0kb downstream 7498 true Scaffold216: 131766-139263 Capsella grandiflora
Cagra.0216s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 137264-139263 Capsella grandiflora
Cagra.0216s0034 5.0kb upstream 5.0kb upstream 10498 true Scaffold216: 126766-137263 Capsella grandiflora
Cagra.0216s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 126766-131765 Capsella grandiflora
Cagra.0216s0034 5.0kb downstream 5.0kb downstream 10498 true Scaffold216: 131766-142263 Capsella grandiflora
Cagra.0216s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 137264-142263 Capsella grandiflora
Cagra.0216s0034 10.0kb upstream 10.0kb upstream 15498 true Scaffold216: 121766-137263 Capsella grandiflora
Cagra.0216s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 121766-131765 Capsella grandiflora
Cagra.0216s0034 10.0kb downstream 10.0kb downstream 15498 true Scaffold216: 131766-147263 Capsella grandiflora
Cagra.0216s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold216: 137264-147263 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380673 5261 Brassicaceae View MSA
123836509 5264 Brassicales-Malvales View MSA
124341273 5266 SBM View MSA
124243432 5268 Malvidae View MSA
124061795 5270 Rosid View MSA
123746942 5271 Pentapetalae View MSA
122786067 5272 Eudicot View MSA
122043253 5273 Angiosperm View MSA
121347121 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain