Gene : Cagra.0228s0037 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31972:SF16 - EXPRESSED PROTEIN Genomic Order:  37
Name:  ? Cagra.0228s0037 Secondary Identifier:  ? PAC:28914695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0228s0037 0.5kb upstream 0.5kb upstream 2261 true Scaffold228: 138498-140758 Capsella grandiflora
Cagra.0228s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold228: 140259-140758 Capsella grandiflora
Cagra.0228s0037 0.5kb downstream 0.5kb downstream 2261 true Scaffold228: 137998-140258 Capsella grandiflora
Cagra.0228s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold228: 137998-138497 Capsella grandiflora
Cagra.0228s0037 1.0kb upstream 1.0kb upstream 2761 true Scaffold228: 138498-141258 Capsella grandiflora
Cagra.0228s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold228: 140259-141258 Capsella grandiflora
Cagra.0228s0037 1.0kb downstream 1.0kb downstream 2761 true Scaffold228: 137498-140258 Capsella grandiflora
Cagra.0228s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold228: 137498-138497 Capsella grandiflora
Cagra.0228s0037 2.0kb upstream 2.0kb upstream 3761 true Scaffold228: 138498-142258 Capsella grandiflora
Cagra.0228s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold228: 140259-142258 Capsella grandiflora
Cagra.0228s0037 2.0kb downstream 2.0kb downstream 3761 true Scaffold228: 136498-140258 Capsella grandiflora
Cagra.0228s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold228: 136498-138497 Capsella grandiflora
Cagra.0228s0037 5.0kb upstream 5.0kb upstream 6761 true Scaffold228: 138498-145258 Capsella grandiflora
Cagra.0228s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold228: 140259-145258 Capsella grandiflora
Cagra.0228s0037 5.0kb downstream 5.0kb downstream 6761 true Scaffold228: 133498-140258 Capsella grandiflora
Cagra.0228s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold228: 133498-138497 Capsella grandiflora
Cagra.0228s0037 10.0kb upstream 10.0kb upstream 11761 true Scaffold228: 138498-150258 Capsella grandiflora
Cagra.0228s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold228: 140259-150258 Capsella grandiflora
Cagra.0228s0037 10.0kb downstream 10.0kb downstream 11761 true Scaffold228: 128498-140258 Capsella grandiflora
Cagra.0228s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold228: 128498-138497 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370228 5261 Brassicaceae View MSA
123839070 5264 Brassicales-Malvales View MSA
124349443 5266 SBM View MSA
124243962 5268 Malvidae View MSA
124075543 5270 Rosid View MSA
123749056 5271 Pentapetalae View MSA
122772967 5272 Eudicot View MSA
122050647 5273 Angiosperm View MSA
121312046 5274 Embryophyte View MSA
123349257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain