Gene : Cagra.0202s0036 C. grandiflora v1.1
Defline:  (1 of 1) KOG2821 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A Genomic Order:  36
Name:  ? Cagra.0202s0036 Secondary Identifier:  ? PAC:28919077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0036 0.5kb upstream 0.5kb upstream 2846 true Scaffold202: 128904-131749 Capsella grandiflora
Cagra.0202s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 131250-131749 Capsella grandiflora
Cagra.0202s0036 0.5kb downstream 0.5kb downstream 2846 true Scaffold202: 128404-131249 Capsella grandiflora
Cagra.0202s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 128404-128903 Capsella grandiflora
Cagra.0202s0036 1.0kb upstream 1.0kb upstream 3346 true Scaffold202: 128904-132249 Capsella grandiflora
Cagra.0202s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 131250-132249 Capsella grandiflora
Cagra.0202s0036 1.0kb downstream 1.0kb downstream 3346 true Scaffold202: 127904-131249 Capsella grandiflora
Cagra.0202s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 127904-128903 Capsella grandiflora
Cagra.0202s0036 2.0kb upstream 2.0kb upstream 4346 true Scaffold202: 128904-133249 Capsella grandiflora
Cagra.0202s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 131250-133249 Capsella grandiflora
Cagra.0202s0036 2.0kb downstream 2.0kb downstream 4346 true Scaffold202: 126904-131249 Capsella grandiflora
Cagra.0202s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 126904-128903 Capsella grandiflora
Cagra.0202s0036 5.0kb upstream 5.0kb upstream 7346 true Scaffold202: 128904-136249 Capsella grandiflora
Cagra.0202s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 131250-136249 Capsella grandiflora
Cagra.0202s0036 5.0kb downstream 5.0kb downstream 7346 true Scaffold202: 123904-131249 Capsella grandiflora
Cagra.0202s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 123904-128903 Capsella grandiflora
Cagra.0202s0036 10.0kb upstream 10.0kb upstream 12346 true Scaffold202: 128904-141249 Capsella grandiflora
Cagra.0202s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 131250-141249 Capsella grandiflora
Cagra.0202s0036 10.0kb downstream 10.0kb downstream 12346 true Scaffold202: 118904-131249 Capsella grandiflora
Cagra.0202s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 118904-128903 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374922 5261 Brassicaceae View MSA
123828483 5264 Brassicales-Malvales View MSA
124338585 5266 SBM View MSA
124243098 5268 Malvidae View MSA
124061122 5270 Rosid View MSA
123737444 5271 Pentapetalae View MSA
122789909 5272 Eudicot View MSA
122045966 5273 Angiosperm View MSA
121349001 5274 Embryophyte View MSA
123425907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain