Gene : Cagra.0210s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.0210s0005 Secondary Identifier:  ? PAC:28908204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0210s0005 0.5kb upstream 0.5kb upstream 3265 true Scaffold210: 34992-38256 Capsella grandiflora
Cagra.0210s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold210: 34992-35491 Capsella grandiflora
Cagra.0210s0005 0.5kb downstream 0.5kb downstream 3265 true Scaffold210: 35492-38756 Capsella grandiflora
Cagra.0210s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold210: 38257-38756 Capsella grandiflora
Cagra.0210s0005 1.0kb upstream 1.0kb upstream 3765 true Scaffold210: 34492-38256 Capsella grandiflora
Cagra.0210s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold210: 34492-35491 Capsella grandiflora
Cagra.0210s0005 1.0kb downstream 1.0kb downstream 3765 true Scaffold210: 35492-39256 Capsella grandiflora
Cagra.0210s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold210: 38257-39256 Capsella grandiflora
Cagra.0210s0005 2.0kb upstream 2.0kb upstream 4765 true Scaffold210: 33492-38256 Capsella grandiflora
Cagra.0210s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold210: 33492-35491 Capsella grandiflora
Cagra.0210s0005 2.0kb downstream 2.0kb downstream 4765 true Scaffold210: 35492-40256 Capsella grandiflora
Cagra.0210s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold210: 38257-40256 Capsella grandiflora
Cagra.0210s0005 5.0kb upstream 5.0kb upstream 7765 true Scaffold210: 30492-38256 Capsella grandiflora
Cagra.0210s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold210: 30492-35491 Capsella grandiflora
Cagra.0210s0005 5.0kb downstream 5.0kb downstream 7765 true Scaffold210: 35492-43256 Capsella grandiflora
Cagra.0210s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold210: 38257-43256 Capsella grandiflora
Cagra.0210s0005 10.0kb upstream 10.0kb upstream 12765 true Scaffold210: 25492-38256 Capsella grandiflora
Cagra.0210s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold210: 25492-35491 Capsella grandiflora
Cagra.0210s0005 10.0kb downstream 10.0kb downstream 12765 true Scaffold210: 35492-48256 Capsella grandiflora
Cagra.0210s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold210: 38257-48256 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368502 5261 Brassicaceae View MSA
123833736 5264 Brassicales-Malvales View MSA
124344326 5266 SBM View MSA
124241182 5268 Malvidae View MSA
124067305 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain