Gene : Cagra.0216s0011 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  11
Name:  ? Cagra.0216s0011 Secondary Identifier:  ? PAC:28914353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0011 0.5kb upstream 0.5kb upstream 3433 true Scaffold216: 44033-47465 Capsella grandiflora
Cagra.0216s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 46966-47465 Capsella grandiflora
Cagra.0216s0011 0.5kb downstream 0.5kb downstream 3433 true Scaffold216: 43533-46965 Capsella grandiflora
Cagra.0216s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 43533-44032 Capsella grandiflora
Cagra.0216s0011 1.0kb upstream 1.0kb upstream 3933 true Scaffold216: 44033-47965 Capsella grandiflora
Cagra.0216s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 46966-47965 Capsella grandiflora
Cagra.0216s0011 1.0kb downstream 1.0kb downstream 3933 true Scaffold216: 43033-46965 Capsella grandiflora
Cagra.0216s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 43033-44032 Capsella grandiflora
Cagra.0216s0011 2.0kb upstream 2.0kb upstream 4933 true Scaffold216: 44033-48965 Capsella grandiflora
Cagra.0216s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 46966-48965 Capsella grandiflora
Cagra.0216s0011 2.0kb downstream 2.0kb downstream 4933 true Scaffold216: 42033-46965 Capsella grandiflora
Cagra.0216s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 42033-44032 Capsella grandiflora
Cagra.0216s0011 5.0kb upstream 5.0kb upstream 7933 true Scaffold216: 44033-51965 Capsella grandiflora
Cagra.0216s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 46966-51965 Capsella grandiflora
Cagra.0216s0011 5.0kb downstream 5.0kb downstream 7933 true Scaffold216: 39033-46965 Capsella grandiflora
Cagra.0216s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 39033-44032 Capsella grandiflora
Cagra.0216s0011 10.0kb upstream 10.0kb upstream 12933 true Scaffold216: 44033-56965 Capsella grandiflora
Cagra.0216s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 46966-56965 Capsella grandiflora
Cagra.0216s0011 10.0kb downstream 10.0kb downstream 12933 true Scaffold216: 34033-46965 Capsella grandiflora
Cagra.0216s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold216: 34033-44032 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378634 5261 Brassicaceae View MSA
123830526 5264 Brassicales-Malvales View MSA
124346164 5266 SBM View MSA
124240877 5268 Malvidae View MSA
124061532 5270 Rosid View MSA
123741129 5271 Pentapetalae View MSA
122786104 5272 Eudicot View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain