Protein Family : pentatricopeptide, putative, expressed 122045308

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  62
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62 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28094.t000011 (1 of 6) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) R. communis v0.1 7066   28094: 95449-102514
Cucsa.058660 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. sativus v1.0 4543   scaffold00614: 785206-789748
orange1.1g007543m.g (1 of 187) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. sinensis v1.1 4841   scaffold00041: 539457-544297
AT3G59040 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. thaliana TAIR10 3000   Chr3: 21821349-21824348
Thhalv10005856m.g (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) E. salsugineum v1.0 3026   scaffold_19: 1572820-1575845
Ciclev10014674m.g (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. clementina v1.0 4825   scaffold_2: 11487591-11492415
Lus10027829.g (1 of 308) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) L. usitatissimum v1.0 2499   scaffold1143: 550733-553231
Gorai.012G039700 (1 of 211) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) G. raimondii v2.1 6467   Chr12: 4926940-4933406
Thecc1EG001902 (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) T. cacao v1.1 7237   scaffold_1: 10162102-10169338
Migut.M00108 (1 of 234) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) M. guttatus v2.0 4933   scaffold_13: 654235-659167
Araha.10825s0004 (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. halleri v1.1 2854   Scaffold10825: 13103-15956
Cagra.0216s0011 (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. grandiflora v1.1 2933   Scaffold216: 44033-46965
Glyma.10G285200 (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) G. max Wm82.a2.v1 4181   Chr10: 50541276-50545456
Glyma.20G103800 (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) G. max Wm82.a2.v1 4201   Chr20: 34643077-34647277
Brara.I04060 (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. rapa FPsc v1.3 3334   A09: 36591217-36594550
Bostr.20903s0136 (1 of 182) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. stricta v1.2 2890   Scaffold20903: 624264-627153
Medtr1g114300 (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) M. truncatula Mt4.0v1 5002   chr1: 51583476-51588477
SapurV1A.0977s0100 (1 of 213) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) S. purpurea v1.0 5834   chr16: 11635631-11641464
evm_27.TU.AmTr_v1.0_scaffold00092.44 (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. trichopoda v1.0 10325   AmTr_v1.0_scaffold00092: 946680-957004
Traes_3B_B2BB8874A (1 of 495) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) T. aestivum v2.2 3815   ta_iwgsc_3b_v1_10435654: 9522-13336
Eucgr.K01239 (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) E. grandis v2.0 6680   Chr11: 15833778-15840457
Prupe.3G180100 (1 of 207) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) P. persica v2.1 6233   Pp03: 19607767-19613999
Manes.09G006600 (1 of 205) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) M. esculenta v6.1 8501   Chromosome09: 1429260-1437760
Kalax.0076s0010 (1 of 379) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) K. laxiflora v1.1 5447   scaffold_76: 40665-46111
Seita.6G035900 (1 of 170) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) S. italica v2.2 4897   scaffold_6: 2709612-2714508
Bradi3g14950 (1 of 157) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. distachyon v3.1 5215   Bd3: 13289575-13294789
Aco014839 (1 of 490) PF13041 - PPR repeat family (PPR_2) A. comosus v3 4496   LG14: 549203-553698
Aqcoe5G464800 (1 of 285) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. coerulea v3.1 5461   Chr_05: 43789108-43794568
LOC_Os08g09270 (1 of 155) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) O. sativa v7.0 4409   Chr8: 5384443-5388851
Zosma170g00550 (1 of 99) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Z. marina v2.2 2068   scaffold_170: 360688-362755

62 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g007543m C. sinensis v1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
AT3G59040.2 A. thaliana TAIR10 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Thhalv10005856m E. salsugineum v1.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Ciclev10014674m C. clementina v1.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Thecc1EG001902t1 T. cacao v1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Bostr.20903s0136.1.p B. stricta v1.2 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
SapurV1A.0977s0100.1.p S. purpurea v1.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00092.44 A. trichopoda v1.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Traes_3B_B2BB8874A.1 T. aestivum v2.2 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Eucgr.K01239.1.p E. grandis v2.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Manes.09G006600.1.p M. esculenta v6.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Seita.6G035900.1.p S. italica v2.2 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Bradi3g14950.1.p B. distachyon v3.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Brast03G035000.1.p B. stacei v1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Aco014839.1 A. comosus v3 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Aqcoe5G464800.1.p A. coerulea v3.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
LOC_Os08g09270.1 O. sativa v7.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Zosma170g00550.1 Z. marina v2.2 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Kaladp0011s0380.1.p K. fedtschenkoi v1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
DCAR_023000 D. carota v2.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
AUR62002293-RA C. quinoa v1.0 122045308 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Zm00008a037058_P01 Z. mays PH207 v1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Potri.001G220300.1.p P. trichocarpa v3.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Podel.01G231800.1.p P. deltoides WV94 v2.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Pavir.6KG089500.1.p P. virgatum v4.1 122045308 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Sobic.007G069400.1.p S. bicolor v3.1.1 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
HORVU3Hr1G114390.2 H. vulgare r1 122045308 pentatricopeptide, putative, expressed 2 5273 Angiosperm
HORVU3Hr1G114340.4 H. vulgare r1 122045308 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Ca_05374 C. arietinum v1.0 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Zm00001d024248_P001 Z. mays RefGen_V4 122045308 pentatricopeptide, putative, expressed 1 5273 Angiosperm