Gene : Bradi3g14950 B. distachyon v3.1
Defline:  (1 of 157) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1862
Name:  ? Bradi3g14950 Secondary Identifier:  ? PAC:32813489
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14950 0.5kb upstream 0.5kb upstream 5715 true Bd3: 13289575-13295289 Brachypodium distachyon
Bradi3g14950 0.5kb upstream 0.5kb upstream 500 false Bd3: 13294790-13295289 Brachypodium distachyon
Bradi3g14950 0.5kb downstream 0.5kb downstream 5715 true Bd3: 13289075-13294789 Brachypodium distachyon
Bradi3g14950 0.5kb downstream 0.5kb downstream 500 false Bd3: 13289075-13289574 Brachypodium distachyon
Bradi3g14950 1.0kb upstream 1.0kb upstream 6215 true Bd3: 13289575-13295789 Brachypodium distachyon
Bradi3g14950 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13294790-13295789 Brachypodium distachyon
Bradi3g14950 1.0kb downstream 1.0kb downstream 6215 true Bd3: 13288575-13294789 Brachypodium distachyon
Bradi3g14950 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13288575-13289574 Brachypodium distachyon
Bradi3g14950 2.0kb upstream 2.0kb upstream 7215 true Bd3: 13289575-13296789 Brachypodium distachyon
Bradi3g14950 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13294790-13296789 Brachypodium distachyon
Bradi3g14950 2.0kb downstream 2.0kb downstream 7215 true Bd3: 13287575-13294789 Brachypodium distachyon
Bradi3g14950 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13287575-13289574 Brachypodium distachyon
Bradi3g14950 5.0kb upstream 5.0kb upstream 10215 true Bd3: 13289575-13299789 Brachypodium distachyon
Bradi3g14950 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13294790-13299789 Brachypodium distachyon
Bradi3g14950 5.0kb downstream 5.0kb downstream 10215 true Bd3: 13284575-13294789 Brachypodium distachyon
Bradi3g14950 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13284575-13289574 Brachypodium distachyon
Bradi3g14950 10.0kb upstream 10.0kb upstream 15215 true Bd3: 13289575-13304789 Brachypodium distachyon
Bradi3g14950 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13294790-13304789 Brachypodium distachyon
Bradi3g14950 10.0kb downstream 10.0kb downstream 15215 true Bd3: 13279575-13294789 Brachypodium distachyon
Bradi3g14950 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13279575-13289574 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572611 5269 Grass View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.491     High  
cufflinks 76.115     High High
cufflinks 44.533     High  
cufflinks 63.932     High High
cufflinks 7.621       Low
cufflinks 60.651     High  
cufflinks 62.982     High High
cufflinks 24.375     High  
cufflinks 39.564     High  
cufflinks 22.941     High  
cufflinks 43.057     High  
cufflinks 44.805     High  
cufflinks 33.898     High  
cufflinks 45.458     High  
cufflinks 22.509     High  
cufflinks 63.347     High High
cufflinks 23.835     High  
cufflinks 6.041       Low
cufflinks 16.715     High  
cufflinks 1.945       Low
cufflinks 18.597     High  
cufflinks 25.633     High  
cufflinks 21.427     High  
cufflinks 42.239     High  
cufflinks 62.737     High High
cufflinks 34.588     High  
cufflinks 46.976     High  
cufflinks 29.714     High  
cufflinks 27.381     High  
cufflinks 47.618     High  

0 Strain