Gene : evm_27.TU.AmTr_v1.0_scaffold00092.44 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00092.44 Secondary Identifier:  ? PAC:31552020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00092.44 0.5kb upstream 0.5kb upstream 10825 true AmTr_v1.0_scaffold00092: 946180-957004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00092: 946180-946679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 0.5kb downstream 0.5kb downstream 10825 true AmTr_v1.0_scaffold00092: 946680-957504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00092: 957005-957504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 1.0kb upstream 1.0kb upstream 11325 true AmTr_v1.0_scaffold00092: 945680-957004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00092: 945680-946679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 1.0kb downstream 1.0kb downstream 11325 true AmTr_v1.0_scaffold00092: 946680-958004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00092: 957005-958004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 2.0kb upstream 2.0kb upstream 12325 true AmTr_v1.0_scaffold00092: 944680-957004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00092: 944680-946679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 2.0kb downstream 2.0kb downstream 12325 true AmTr_v1.0_scaffold00092: 946680-959004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00092: 957005-959004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 5.0kb upstream 5.0kb upstream 15325 true AmTr_v1.0_scaffold00092: 941680-957004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00092: 941680-946679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 5.0kb downstream 5.0kb downstream 15325 true AmTr_v1.0_scaffold00092: 946680-962004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00092: 957005-962004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 10.0kb upstream 10.0kb upstream 20325 true AmTr_v1.0_scaffold00092: 936680-957004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00092: 936680-946679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 10.0kb downstream 10.0kb downstream 20325 true AmTr_v1.0_scaffold00092: 946680-967004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.44 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00092: 957005-967004 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain