Gene : Glyma.10G285200 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2852
Name:  ? Glyma.10G285200 Secondary Identifier:  ? PAC:30473813
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G285200 0.5kb upstream 0.5kb upstream 4681 true Chr10: 50541276-50545956 Glycine max
Glyma.10G285200 0.5kb upstream 0.5kb upstream 500 false Chr10: 50545457-50545956 Glycine max
Glyma.10G285200 0.5kb downstream 0.5kb downstream 4681 true Chr10: 50540776-50545456 Glycine max
Glyma.10G285200 0.5kb downstream 0.5kb downstream 500 false Chr10: 50540776-50541275 Glycine max
Glyma.10G285200 1.0kb upstream 1.0kb upstream 5181 true Chr10: 50541276-50546456 Glycine max
Glyma.10G285200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50545457-50546456 Glycine max
Glyma.10G285200 1.0kb downstream 1.0kb downstream 5181 true Chr10: 50540276-50545456 Glycine max
Glyma.10G285200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50540276-50541275 Glycine max
Glyma.10G285200 2.0kb upstream 2.0kb upstream 6181 true Chr10: 50541276-50547456 Glycine max
Glyma.10G285200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50545457-50547456 Glycine max
Glyma.10G285200 2.0kb downstream 2.0kb downstream 6181 true Chr10: 50539276-50545456 Glycine max
Glyma.10G285200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50539276-50541275 Glycine max
Glyma.10G285200 5.0kb upstream 5.0kb upstream 9181 true Chr10: 50541276-50550456 Glycine max
Glyma.10G285200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50545457-50550456 Glycine max
Glyma.10G285200 5.0kb downstream 5.0kb downstream 9181 true Chr10: 50536276-50545456 Glycine max
Glyma.10G285200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50536276-50541275 Glycine max
Glyma.10G285200 10.0kb upstream 10.0kb upstream 14181 true Chr10: 50541276-50555456 Glycine max
Glyma.10G285200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50545457-50555456 Glycine max
Glyma.10G285200 10.0kb downstream 10.0kb downstream 14181 true Chr10: 50531276-50545456 Glycine max
Glyma.10G285200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50531276-50541275 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308338 5265 Fabidae View MSA
124061532 5270 Rosid View MSA
123741129 5271 Pentapetalae View MSA
122786104 5272 Eudicot View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2945 0.0 35.49   High
cufflinks 7.46227 0.0 20.3729    
cufflinks 3.81871 0.0 11.0939    
cufflinks 5.92131 0.0 16.4509    
cufflinks 3.18678 0.0 9.5654    
cufflinks 1.67093 0.0 5.48216   Low
cufflinks 4.18093 0.0 12.1339    
cufflinks 4.75068 0.0 13.5096    
cufflinks 3.15458 0.0 9.46277    
cufflinks 2.003        
cufflinks 0.217       Low
cufflinks 3.659        
cufflinks 1.049        
cufflinks 1.144        
cufflinks 0.553        
cufflinks 5.455        
cufflinks 0.289       Low
cufflinks 4.532        
cufflinks 3.325        
cufflinks 10.215     High High
cufflinks 0.341       Low
cufflinks 7.897     High High
cufflinks 5.983        
cufflinks 0.329       Low
cufflinks 7.954     High High
cufflinks 0.39       Low

0 Strain