Gene : Cagra.0216s0016 C. grandiflora v1.1
Defline:  (1 of 4) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  16
Name:  ? Cagra.0216s0016 Secondary Identifier:  ? PAC:28914356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0016 0.5kb upstream 0.5kb upstream 3992 true Scaffold216: 62852-66843 Capsella grandiflora
Cagra.0216s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 62852-63351 Capsella grandiflora
Cagra.0216s0016 0.5kb downstream 0.5kb downstream 3992 true Scaffold216: 63352-67343 Capsella grandiflora
Cagra.0216s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 66844-67343 Capsella grandiflora
Cagra.0216s0016 1.0kb upstream 1.0kb upstream 4492 true Scaffold216: 62352-66843 Capsella grandiflora
Cagra.0216s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 62352-63351 Capsella grandiflora
Cagra.0216s0016 1.0kb downstream 1.0kb downstream 4492 true Scaffold216: 63352-67843 Capsella grandiflora
Cagra.0216s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 66844-67843 Capsella grandiflora
Cagra.0216s0016 2.0kb upstream 2.0kb upstream 5492 true Scaffold216: 61352-66843 Capsella grandiflora
Cagra.0216s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 61352-63351 Capsella grandiflora
Cagra.0216s0016 2.0kb downstream 2.0kb downstream 5492 true Scaffold216: 63352-68843 Capsella grandiflora
Cagra.0216s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 66844-68843 Capsella grandiflora
Cagra.0216s0016 5.0kb upstream 5.0kb upstream 8492 true Scaffold216: 58352-66843 Capsella grandiflora
Cagra.0216s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 58352-63351 Capsella grandiflora
Cagra.0216s0016 5.0kb downstream 5.0kb downstream 8492 true Scaffold216: 63352-71843 Capsella grandiflora
Cagra.0216s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 66844-71843 Capsella grandiflora
Cagra.0216s0016 10.0kb upstream 10.0kb upstream 13492 true Scaffold216: 53352-66843 Capsella grandiflora
Cagra.0216s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 53352-63351 Capsella grandiflora
Cagra.0216s0016 10.0kb downstream 10.0kb downstream 13492 true Scaffold216: 63352-76843 Capsella grandiflora
Cagra.0216s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold216: 66844-76843 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376451 5261 Brassicaceae View MSA
123830887 5264 Brassicales-Malvales View MSA
124346562 5266 SBM View MSA
124247833 5268 Malvidae View MSA
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain