Gene : Cagra.0430s0049 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24078:SF276 - CHAPERONE PROTEIN DNAJ 6 Genomic Order:  49
Name:  ? Cagra.0430s0049 Secondary Identifier:  ? PAC:28917392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0049 0.5kb upstream 0.5kb upstream 2767 true Scaffold430: 173933-176699 Capsella grandiflora
Cagra.0430s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 173933-174432 Capsella grandiflora
Cagra.0430s0049 0.5kb downstream 0.5kb downstream 2767 true Scaffold430: 174433-177199 Capsella grandiflora
Cagra.0430s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 176700-177199 Capsella grandiflora
Cagra.0430s0049 1.0kb upstream 1.0kb upstream 3267 true Scaffold430: 173433-176699 Capsella grandiflora
Cagra.0430s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 173433-174432 Capsella grandiflora
Cagra.0430s0049 1.0kb downstream 1.0kb downstream 3267 true Scaffold430: 174433-177699 Capsella grandiflora
Cagra.0430s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 176700-177699 Capsella grandiflora
Cagra.0430s0049 2.0kb upstream 2.0kb upstream 4267 true Scaffold430: 172433-176699 Capsella grandiflora
Cagra.0430s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 172433-174432 Capsella grandiflora
Cagra.0430s0049 2.0kb downstream 2.0kb downstream 4267 true Scaffold430: 174433-178699 Capsella grandiflora
Cagra.0430s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 176700-178699 Capsella grandiflora
Cagra.0430s0049 5.0kb upstream 5.0kb upstream 7267 true Scaffold430: 169433-176699 Capsella grandiflora
Cagra.0430s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 169433-174432 Capsella grandiflora
Cagra.0430s0049 5.0kb downstream 5.0kb downstream 7267 true Scaffold430: 174433-181699 Capsella grandiflora
Cagra.0430s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 176700-181699 Capsella grandiflora
Cagra.0430s0049 10.0kb upstream 10.0kb upstream 12267 true Scaffold430: 164433-176699 Capsella grandiflora
Cagra.0430s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 164433-174432 Capsella grandiflora
Cagra.0430s0049 10.0kb downstream 10.0kb downstream 12267 true Scaffold430: 174433-186699 Capsella grandiflora
Cagra.0430s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 176700-186699 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
122377310 5261 Brassicaceae View MSA
123837895 5264 Brassicales-Malvales View MSA
124346382 5266 SBM View MSA
124245145 5268 Malvidae View MSA
124061055 5270 Rosid View MSA
123736570 5271 Pentapetalae View MSA
122788654 5272 Eudicot View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain