Gene : Cagra.0434s0007 C. grandiflora v1.1
Defline:  (1 of 48) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  7
Name:  ? Cagra.0434s0007 Secondary Identifier:  ? PAC:28897387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0007 0.5kb upstream 0.5kb upstream 2438 true Scaffold434: 16393-18830 Capsella grandiflora
Cagra.0434s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 18331-18830 Capsella grandiflora
Cagra.0434s0007 0.5kb downstream 0.5kb downstream 2438 true Scaffold434: 15893-18330 Capsella grandiflora
Cagra.0434s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 15893-16392 Capsella grandiflora
Cagra.0434s0007 1.0kb upstream 1.0kb upstream 2938 true Scaffold434: 16393-19330 Capsella grandiflora
Cagra.0434s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 18331-19330 Capsella grandiflora
Cagra.0434s0007 1.0kb downstream 1.0kb downstream 2938 true Scaffold434: 15393-18330 Capsella grandiflora
Cagra.0434s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 15393-16392 Capsella grandiflora
Cagra.0434s0007 2.0kb upstream 2.0kb upstream 3938 true Scaffold434: 16393-20330 Capsella grandiflora
Cagra.0434s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 18331-20330 Capsella grandiflora
Cagra.0434s0007 2.0kb downstream 2.0kb downstream 3938 true Scaffold434: 14393-18330 Capsella grandiflora
Cagra.0434s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 14393-16392 Capsella grandiflora
Cagra.0434s0007 5.0kb upstream 5.0kb upstream 6938 true Scaffold434: 16393-23330 Capsella grandiflora
Cagra.0434s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 18331-23330 Capsella grandiflora
Cagra.0434s0007 5.0kb downstream 5.0kb downstream 6938 true Scaffold434: 11393-18330 Capsella grandiflora
Cagra.0434s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 11393-16392 Capsella grandiflora
Cagra.0434s0007 10.0kb upstream 10.0kb upstream 11938 true Scaffold434: 16393-28330 Capsella grandiflora
Cagra.0434s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 18331-28330 Capsella grandiflora
Cagra.0434s0007 10.0kb downstream 10.0kb downstream 11938 true Scaffold434: 6393-18330 Capsella grandiflora
Cagra.0434s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 6393-16392 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344188 5261 Brassicaceae View MSA
123784229 5264 Brassicales-Malvales View MSA
124282425 5266 SBM View MSA
124252619 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain