Gene : Cagra.0434s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19854:SF15 - TRANSDUCIN BETA-LIKE PROTEIN 3 Genomic Order:  42
Name:  ? Cagra.0434s0042 Secondary Identifier:  ? PAC:28897377
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0042 0.5kb upstream 0.5kb upstream 5610 true Scaffold434: 150769-156378 Capsella grandiflora
Cagra.0434s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 155879-156378 Capsella grandiflora
Cagra.0434s0042 0.5kb downstream 0.5kb downstream 5610 true Scaffold434: 150269-155878 Capsella grandiflora
Cagra.0434s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 150269-150768 Capsella grandiflora
Cagra.0434s0042 1.0kb upstream 1.0kb upstream 6110 true Scaffold434: 150769-156878 Capsella grandiflora
Cagra.0434s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 155879-156878 Capsella grandiflora
Cagra.0434s0042 1.0kb downstream 1.0kb downstream 6110 true Scaffold434: 149769-155878 Capsella grandiflora
Cagra.0434s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 149769-150768 Capsella grandiflora
Cagra.0434s0042 2.0kb upstream 2.0kb upstream 7110 true Scaffold434: 150769-157878 Capsella grandiflora
Cagra.0434s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 155879-157878 Capsella grandiflora
Cagra.0434s0042 2.0kb downstream 2.0kb downstream 7110 true Scaffold434: 148769-155878 Capsella grandiflora
Cagra.0434s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 148769-150768 Capsella grandiflora
Cagra.0434s0042 5.0kb upstream 5.0kb upstream 10110 true Scaffold434: 150769-160878 Capsella grandiflora
Cagra.0434s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 155879-160878 Capsella grandiflora
Cagra.0434s0042 5.0kb downstream 5.0kb downstream 10110 true Scaffold434: 145769-155878 Capsella grandiflora
Cagra.0434s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 145769-150768 Capsella grandiflora
Cagra.0434s0042 10.0kb upstream 10.0kb upstream 15110 true Scaffold434: 150769-165878 Capsella grandiflora
Cagra.0434s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 155879-165878 Capsella grandiflora
Cagra.0434s0042 10.0kb downstream 10.0kb downstream 15110 true Scaffold434: 140769-155878 Capsella grandiflora
Cagra.0434s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 140769-150768 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041178 5273 Angiosperm View MSA
122376028 5261 Brassicaceae View MSA
123832145 5264 Brassicales-Malvales View MSA
124338171 5266 SBM View MSA
124241085 5268 Malvidae View MSA
124061346 5270 Rosid View MSA
123737886 5271 Pentapetalae View MSA
122786507 5272 Eudicot View MSA
121349403 5274 Embryophyte View MSA
123428044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain