Gene : Cagra.0430s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23270:SF10 - PROTEIN RRP5 HOMOLOG Genomic Order:  26
Name:  ? Cagra.0430s0026 Secondary Identifier:  ? PAC:28917323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0026 0.5kb upstream 0.5kb upstream 13171 true Scaffold430: 90562-103732 Capsella grandiflora
Cagra.0430s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 103233-103732 Capsella grandiflora
Cagra.0430s0026 0.5kb downstream 0.5kb downstream 13171 true Scaffold430: 90062-103232 Capsella grandiflora
Cagra.0430s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 90062-90561 Capsella grandiflora
Cagra.0430s0026 1.0kb upstream 1.0kb upstream 13671 true Scaffold430: 90562-104232 Capsella grandiflora
Cagra.0430s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 103233-104232 Capsella grandiflora
Cagra.0430s0026 1.0kb downstream 1.0kb downstream 13671 true Scaffold430: 89562-103232 Capsella grandiflora
Cagra.0430s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 89562-90561 Capsella grandiflora
Cagra.0430s0026 2.0kb upstream 2.0kb upstream 14671 true Scaffold430: 90562-105232 Capsella grandiflora
Cagra.0430s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 103233-105232 Capsella grandiflora
Cagra.0430s0026 2.0kb downstream 2.0kb downstream 14671 true Scaffold430: 88562-103232 Capsella grandiflora
Cagra.0430s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 88562-90561 Capsella grandiflora
Cagra.0430s0026 5.0kb upstream 5.0kb upstream 17671 true Scaffold430: 90562-108232 Capsella grandiflora
Cagra.0430s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 103233-108232 Capsella grandiflora
Cagra.0430s0026 5.0kb downstream 5.0kb downstream 17671 true Scaffold430: 85562-103232 Capsella grandiflora
Cagra.0430s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 85562-90561 Capsella grandiflora
Cagra.0430s0026 10.0kb upstream 10.0kb upstream 22671 true Scaffold430: 90562-113232 Capsella grandiflora
Cagra.0430s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 103233-113232 Capsella grandiflora
Cagra.0430s0026 10.0kb downstream 10.0kb downstream 22671 true Scaffold430: 80562-103232 Capsella grandiflora
Cagra.0430s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 80562-90561 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375746 5261 Brassicaceae View MSA
123829274 5264 Brassicales-Malvales View MSA
124342249 5266 SBM View MSA
124248037 5268 Malvidae View MSA
124068160 5270 Rosid View MSA
123740236 5271 Pentapetalae View MSA
122787572 5272 Eudicot View MSA
122045709 5273 Angiosperm View MSA
121346258 5274 Embryophyte View MSA
123424813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain