Gene : Cagra.0450s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21669 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS Genomic Order:  9
Name:  ? Cagra.0450s0009 Secondary Identifier:  ? PAC:28913151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0450s0009 0.5kb upstream 0.5kb upstream 5492 true Scaffold450: 29896-35387 Capsella grandiflora
Cagra.0450s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold450: 34888-35387 Capsella grandiflora
Cagra.0450s0009 0.5kb downstream 0.5kb downstream 5492 true Scaffold450: 29396-34887 Capsella grandiflora
Cagra.0450s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold450: 29396-29895 Capsella grandiflora
Cagra.0450s0009 1.0kb upstream 1.0kb upstream 5992 true Scaffold450: 29896-35887 Capsella grandiflora
Cagra.0450s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold450: 34888-35887 Capsella grandiflora
Cagra.0450s0009 1.0kb downstream 1.0kb downstream 5992 true Scaffold450: 28896-34887 Capsella grandiflora
Cagra.0450s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold450: 28896-29895 Capsella grandiflora
Cagra.0450s0009 2.0kb upstream 2.0kb upstream 6992 true Scaffold450: 29896-36887 Capsella grandiflora
Cagra.0450s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold450: 34888-36887 Capsella grandiflora
Cagra.0450s0009 2.0kb downstream 2.0kb downstream 6992 true Scaffold450: 27896-34887 Capsella grandiflora
Cagra.0450s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold450: 27896-29895 Capsella grandiflora
Cagra.0450s0009 5.0kb upstream 5.0kb upstream 9992 true Scaffold450: 29896-39887 Capsella grandiflora
Cagra.0450s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold450: 34888-39887 Capsella grandiflora
Cagra.0450s0009 5.0kb downstream 5.0kb downstream 9992 true Scaffold450: 24896-34887 Capsella grandiflora
Cagra.0450s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold450: 24896-29895 Capsella grandiflora
Cagra.0450s0009 10.0kb upstream 10.0kb upstream 14992 true Scaffold450: 29896-44887 Capsella grandiflora
Cagra.0450s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold450: 34888-44887 Capsella grandiflora
Cagra.0450s0009 10.0kb downstream 10.0kb downstream 14992 true Scaffold450: 19896-34887 Capsella grandiflora
Cagra.0450s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold450: 19896-29895 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379811 5261 Brassicaceae View MSA
123837582 5264 Brassicales-Malvales View MSA
124339372 5266 SBM View MSA
124240339 5268 Malvidae View MSA
124063112 5270 Rosid View MSA
123743839 5271 Pentapetalae View MSA
122787067 5272 Eudicot View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain