Gene : Cagra.0450s0020 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12096 - NUCLEAR PROTEIN SKIP-RELATED Genomic Order:  20
Name:  ? Cagra.0450s0020 Secondary Identifier:  ? PAC:28913137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0450s0020 0.5kb upstream 0.5kb upstream 2939 true Scaffold450: 88102-91040 Capsella grandiflora
Cagra.0450s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold450: 88102-88601 Capsella grandiflora
Cagra.0450s0020 0.5kb downstream 0.5kb downstream 2939 true Scaffold450: 88602-91540 Capsella grandiflora
Cagra.0450s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold450: 91041-91540 Capsella grandiflora
Cagra.0450s0020 1.0kb upstream 1.0kb upstream 3439 true Scaffold450: 87602-91040 Capsella grandiflora
Cagra.0450s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold450: 87602-88601 Capsella grandiflora
Cagra.0450s0020 1.0kb downstream 1.0kb downstream 3439 true Scaffold450: 88602-92040 Capsella grandiflora
Cagra.0450s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold450: 91041-92040 Capsella grandiflora
Cagra.0450s0020 2.0kb upstream 2.0kb upstream 4439 true Scaffold450: 86602-91040 Capsella grandiflora
Cagra.0450s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold450: 86602-88601 Capsella grandiflora
Cagra.0450s0020 2.0kb downstream 2.0kb downstream 4439 true Scaffold450: 88602-93040 Capsella grandiflora
Cagra.0450s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold450: 91041-93040 Capsella grandiflora
Cagra.0450s0020 5.0kb upstream 5.0kb upstream 7439 true Scaffold450: 83602-91040 Capsella grandiflora
Cagra.0450s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold450: 83602-88601 Capsella grandiflora
Cagra.0450s0020 5.0kb downstream 5.0kb downstream 7439 true Scaffold450: 88602-96040 Capsella grandiflora
Cagra.0450s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold450: 91041-96040 Capsella grandiflora
Cagra.0450s0020 10.0kb upstream 10.0kb upstream 12439 true Scaffold450: 78602-91040 Capsella grandiflora
Cagra.0450s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold450: 78602-88601 Capsella grandiflora
Cagra.0450s0020 10.0kb downstream 10.0kb downstream 12439 true Scaffold450: 88602-101040 Capsella grandiflora
Cagra.0450s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold450: 91041-101040 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371112 5261 Brassicaceae View MSA
123831072 5264 Brassicales-Malvales View MSA
124342701 5266 SBM View MSA
124240106 5268 Malvidae View MSA
124064188 5270 Rosid View MSA
123746163 5271 Pentapetalae View MSA
122796652 5272 Eudicot View MSA
122045671 5273 Angiosperm View MSA
121346165 5274 Embryophyte View MSA
123425869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain